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Additional file 10: of A phylogenetic framework of the legume genus Aeschynomene for comparative genetic analysis of the Nod-dependent and Nod-independent symbioses

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posted on 2018-12-05, 05:00 authored by Laurent Brottier, Clémence Chaintreuil, Paul Simion, Céline Scornavacca, Ronan Rivallan, Pierre Mournet, Lionel Moulin, Gwilym Lewis, Joël Fardoux, Spencer Brown, Mario Gomez-Pacheco, Mickaël Bourges, Catherine Hervouet, Mathieu Gueye, Robin Duponnois, Heriniaina Ramanankierana, Herizo Randriambanona, Hervé Vandrot, Maria Zabaleta, Maitrayee DasGupta, Angélique D’Hont, Eric Giraud, Jean-François Arrighi
Figure S7. Phylogenetic networks based on the four nuclear CYP1, eif1a, SuSy and TIP1;1 genes. (a) No-allopolyploidisation hypothesis (T1) based on the concatenated gene tree obtained taking into account the group A (Fig. 2b). (b) No-allopolyploidisation hypothesis (T2) based on the concatenated gene tree obtained taking into account the group B (Fig. 2b). (c) One-allopolyploidisation hypothesis (N1-best). (d) Two-allopolyploidisation hypothesis (N2-best). Blue lines indicate reticulations while other nods of the network are associated to speciation events. Scores obtained for the different phylogenetic networks are indicated. (PPTX 2589 kb)

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