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Population genomics of harbour seal Phoca vitulina from northern British Columbia through California and comparison to Atlantic sub-species

Version 2 2023-05-12, 16:44
Version 1 2023-05-12, 16:40
dataset
posted on 2023-05-12, 16:44 authored by Ben SutherlandBen Sutherland, Ashtin Duguid, Terry Beacham, Strahan Tucker

Data supporting the analyses described in the manuscript 'Population genomics of harbour seal Phoca vitulina from northern British Columbia through California and comparison to Atlantic sub-species', including genotype data outputs from stacks_workflow, and as described in the following GitHub repository: https://github.com/bensutherland/ms_harbour_seal 


note: VCF and genepop are based on either reference-guided genotyping or de novo genotyping, and either are single SNP per locus or multiple SNP per locus (if indicated as such). The normalized and balanced dataset is labeled as 'p4' rather than 'p7' for the reference-guided approach, to indicate that there are only four populations total instead of seven. The normalized and balanced de novo dataset is labeled as 'p2' to indicate that there are two populations being characterized in each. 


Please see the associated manuscript for additional details. 

Funding

Fisheries and Oceans Canada, Species At Risk

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