Ben Sutherland

Postdoctoral Fellow (Biological Sciences)

Québec

Publications

  • Divergent immunity and energetic programs in the gills of migratory and resident Oncorhynchus mykiss ISSN: 0962-1083
  • Comparative transcriptomics of Atlantic Salmo salar, chum Oncorhynchus keta and pink salmon O. gorbuscha during infections with salmon lice Lepeophtheirus salmonis DOI: 10.1186/1471-2164-15-200
  • Characterization of the infectious hematopoietic necrosis virus (IHNV) carrier state in sockeye salmon (Oncorhynchus nerka) DOI: 10.1016/j.fsi.2013.03.102
  • Early response of gene expression in the distal intestine of Atlantic salmon (Salmo salar L.) during the development of soybean meal induced enteritis DOI: 10.1016/j.fsi.2012.11.031
  • Transcriptomics of coping strategies in free-swimming Lepeophtheirus salmonis (Copepoda) larvae responding to abiotic stress ISSN: 0962-1083
  • Differentiating size-dependent responses of juvenile pink salmon (Oncorhynchus gorbuscha) to sea lice (Lepeophtheirus salmonis) infections DOI: 10.1016/j.cbd.2011.04.001
  • GO Trimming: Systematically reducing redundancy in large Gene Ontology datasets DOI: 10.1186/1756-0500-4-267
  • Ecological transcriptomics of lake-type and riverine sockeye salmon (Oncorhynchus nerka) DOI: 10.1186/1472-6785-11-31
  • Salmonid chromosome evolution as revealed by a novel method for comparing RADseq linkage maps
  • Sex matters in Massive Parallel Sequencing: Evidence for biases in genetic parameter estimation and investigation of sex determination systems
  • Genomics and telemetry suggest a role for migration harshness in determining overwintering habitat choice, but not gene flow, in anadromous Arctic Char
  • Relative genomic impacts of translocation history, hatchery practices, and farm selection in Pacific oyster Crassostrea gigas throughout the Northern Hemisphere
  • Sex-biased gene expression and sequence conservation in Atlantic and Pacific salmon lice (Lepeophtheirus salmonis)
  • Migration Harshness Drives Habitat Choice And Local Adaptation In Anadromous Arctic Char: Evidence From Integrating Population Genomics And Acoustic Telemetry
  • Genomic patterns of diversity and divergence of two introduced salmonid species in Patagonia, South America
  • Enhanced transcriptomic responses in the Pacific salmon louse Lepeophtheirus salmonis oncorhynchi to the non-native Atlantic Salmon Salmo salar suggests increased parasite fitness
  • Transcriptomic responses to emamectin benzoate in Pacific and Atlantic Canada salmon lice Lepeophtheirus salmonis with differing levels of drug resistance
  • Infectious hematopoietic necrosis virus (IHNV) persistence in Sockeye Salmon: influence on brain transcriptome and subsequent response to the viral mimic poly(I:C)
  • Sex-specific co-expression networks and sex-biased gene expression in the salmonid Brook Charr Salvelinus fontinalis
  • Sex Chromosome Evolution, Heterochiasmy, and Physiological QTL in the Salmonid Brook Charr Salvelinus fontinalis
  • Relative genomic impacts of translocation history, hatchery practices, and farm selection in Pacific oyster Crassostrea gigas throughout the Northern Hemisphere
  • Identification of hypoxia-specific biomarkers in salmonids using RNA-sequencing and validation using high-throughput qPCR
  • Sex chromosome evolution, heterochiasmy and physiological QTL in the salmonid Brook Charr Salvelinus fontinalis
  • Population structure of eulachon Thaleichthys pacificus from Northern California to Alaska using single nucleotide polymorphisms from direct amplicon sequencing
  • Comparative Genomic Analyses and a Novel Linkage Map for Cisco (Coregonus artedi) Provide Insights into Chromosomal Evolution and Rediploidization Across Salmonids
  • Comparative genomic analyses and a novel linkage map for cisco (Coregonus artedi) provide insights into chromosomal evolution and rediploidization across salmonids
  • In‐field genetic stock identification of overwintering coho salmon in the Gulf of Alaska: Evaluation of Nanopore sequencing for remote real‐time deployment
  • Combining metabarcoding and morphological approaches to identify phytoplankton taxa associated with harmful algal blooms
  • Nsil1-Msp1 RAD-digest Detailed Protocol v1
  • Nsil1-Msp1 RAD-digest Detailed Protocol v2
  • 1% Agarose Gel Electrophoresis Prep v1
  • Population differences in Chinook salmon ( Oncorhynchus tshawytscha ) DNA methylation: Genetic drift and environmental factors
  • Metatranscriptomics reveals a shift in microbial community composition and function during summer months in a coastal marine environment
  • GO Trimming: Systematically reducing redundancy in large Gene Ontology datasets
  • Divergent immunity and energetic programs in the gills of migratory and resident Oncorhynchus mykiss
  • Characterization of the infectious hematopoietic necrosis virus (IHNV) carrier state in sockeye salmon (Oncorhynchus nerka)
  • Transcriptomics of coping strategies in free-swimming Lepeophtheirus salmonis (Copepoda) larvae responding to abiotic stress
  • Ecological transcriptomics of lake-type and riverine sockeye salmon (Oncorhynchus nerka)
  • Early response of gene expression in the distal intestine of Atlantic salmon (Salmo salar L.) during the development of soybean meal induced enteritis
  • Differentiating size-dependent responses of juvenile pink salmon (Oncorhynchus gorbuscha) to sea lice (Lepeophtheirus salmonis) infections
  • Comparative transcriptomics of Atlantic Salmo salar, chum Oncorhynchus keta and pink salmon O. gorbuscha during infections with salmon lice Lepeophtheirus salmonis
  • Sex matters in massive parallel sequencing: Evidence for biases in genetic parameter estimation and investigation of sex determination systems
  • In-field genetic stock identification of overwintering coho salmon in the Gulf of Alaska: Evaluation of Nanopore sequencing for remote real-time deployment

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Co-workers & collaborators

Aimee Lee Houde

Aimee Lee Houde

Arash Akbarzadeh

Arash Akbarzadeh

Ben Sutherland's public data