AMPHORA software for automated phylogenomic analysis

2013-06-14T00:59:23Z (GMT) by Jonathan Eisen
<p>AMPHORA is an Automated Phylogenomic Inference Pipeline for bacterial sequences. From a given a set of protein sequences, it automatically identifies 31 phylogenetic marker genes. It then generates high-quality multiple sequence alignments for these genes and make tree-based phylotype assignments.</p>