Jonathan Eisen

Professor
Davis, CA

Jonathan's public data

Dataset
Tree in Fig.2 - Archaeal and bacterial genomes used by Hug et al. in 2016 to construct a microbial tree of life; MAGs isolated from two hot springs in the Uzon Caldera, Kamchatka, Russia; and all genomes of taxa analyzed in Burgess et al. (2012) with one representative genome on NCBI (Newick file)
Laetitia Wilkins
2018-12-27T20:06:29Z
Dataset
Sequence alignment for phylogenetic tree construction
Laetitia Wilkins
2018-12-27T20:01:03Z
Fileset
Genomes of taxa analyzed in Burgess et al. (2012) from two hot springs in Kamchatka, Russia
Laetitia Wilkins
2018-12-27T18:41:05Z
Fileset
Genomes used to infer a tree of life in Hug et al. (2016) - manually downloaded
Laetitia Wilkins
2018-12-27T18:38:11Z
Fileset
Genomes used to infer a tree of life in Hug et al. (2016) II
Laetitia Wilkins
2018-12-27T18:37:25Z
Fileset
Genomes used to infer a tree of life in Hug et al. (2016) - part I
Laetitia Wilkins
2018-12-27T18:37:05Z
Dataset
Table with taxa we used for the tree of life - archaea and bacteria from Hug et al.'s tree of life in 2016; MAGs isolated from two hot springs in the Uzon Caldera, Kamchatka, Russia; and all taxa from Burgess et al. (2012) with one representative genome on NCBI.
Laetitia Wilkins
2018-07-29T01:39:32Z
Fileset
rRNA gene sequence data and scripts used for PLOS Biology submission "Nitrogen fixation in a landrace of maize is supported by a mucilage-associated diazotrophic microbiota"
Allen Van Deynze
2018-06-22T19:20:51Z
Notes 1993 SSE Meeting
Jonathan Eisen
2017-12-14T21:59:28Z
microBEnet: 
Perspectives on trying to nurture a growing MoBE field
Jonathan Eisen
2017-10-24T17:20:55Z
Card from Emile Zuckerkandl noting acceptance of paper
Jonathan Eisen
2017-01-20T03:51:58Z
project
1993 Eisen et al. Nucl. Acids Research Mutator Motif paper
Jonathan Eisen
2016-07-23T22:40:08Z
project
1995 Eisen RecA Evolution JME
Jonathan Eisen
2016-07-23T22:39:50Z
Figures from this paper in higher resolution and (for some) in color.
Jonathan Eisen
2016-07-23T22:31:40Z
Dataset
RecA and rRNA trees for Eisen 1995 JME
Jonathan Eisen
2016-07-23T22:28:18Z
Dataset
RecA and rRNA alignments used for Eisen JME 1995
Jonathan Eisen
2016-07-23T22:26:16Z
Cover letter
Jonathan Eisen
2016-07-23T22:14:49Z
Partial Lab Notebook
Jonathan Eisen
2016-07-16T20:36:26Z
project
1992 Eisen et al. Solemya velum symbiont 16S paper in J. Bacteriology notes
Jonathan Eisen
2016-07-16T20:18:27Z
Miscellaneous Notes for Project
Jonathan Eisen
2016-07-16T20:13:26Z
Predicted secondary structure of Solemya velum symbiont 16S
Jonathan Eisen
2016-07-16T20:08:53Z
Communications with Journal of Bacteriology
Jonathan Eisen
2016-07-16T19:52:59Z
Thesis Proposal Update
Jonathan Eisen
2016-07-16T19:27:01Z
Thesis Proposal Draft June 2, 1993
Jonathan Eisen
2016-07-16T19:23:57Z
Gordonia tree.pdf
David Coil
2016-06-28T20:07:23Z
Dataset
My recent Twitter Analytics reports (especially for UC Davis communications group)
Jonathan Eisen
2016-04-29T15:47:06Z
collection
Microbiology of the Built Environment (via microBEnet)
Jonathan Eisen
2016-03-25T18:29:29Z
Pubmed Papers on "Microbiome" vs. Year
Jonathan Eisen
2016-01-01T15:57:38Z
Dataset
Demultiplexed reads from Aquarium Project
David Coil
2015-05-27T20:07:57Z
Dataset
Phylogenetic Tree of Burkholderia gladioli str. UCD-UG_CHAPALOTE
Cassandra Ettinger
2014-12-04T21:17:58Z
Dataset
Phylogenetic Tree of Enterobacter sp. str. UCD-UG_FMILLET
Cassandra Ettinger
2014-12-04T21:17:55Z
Fileset
Microbes We Eat Data
Jenna Lang
2014-11-19T18:31:29Z
Dataset
Raw reads from sequencing of Candidatus Ruthia magnifica
David Coil
2014-09-30T22:23:35Z
Dataset
Concatenated alignment of 24 genes for bacteria and archaea
Jenna Lang
2014-08-28T14:35:54Z
Fileset
24 Single Gene Alignments for Bacteria
Jenna Lang
2014-08-28T14:35:39Z
Fileset
24 Single Gene Alignments for Bacteria and Archaea
Jenna Lang
2014-08-28T14:35:35Z
The Seagrass Microbiome
David Coil
2014-05-02T21:53:58Z
From Swab to Publication: Microbial Genome Sequencing Workflow
Madison Dunitz
2014-05-02T21:51:06Z
Project MERCCURI: Bacteria in Space
Ruth Lee
2014-05-02T21:42:51Z
Toward a Global Field Guide for Microorganisms
Jonathan Eisen
2014-02-09T18:59:35Z