PLV_supporting_data

This item is shared privately

dataset

modified on 2020-04-27, 11:24

Protein_clusters.tar.gz - All vcontact2 protein clusters (e-4)

All_proteins.faa.gz - All protein sequences used before clustering

All_PLV_virophages_from_GKS_IMGVR_EBI.fasta.gz - All PLVs and virophages identified (nucleotide)

110_PLV_and_Virophage_MCP-ATPase_alignment.phy - Alignment of MCP-ATPase genes from selected group members

MCP_alignment_GKS_plus_known_PLVs.phy - Alignment of MCP genes for all Gossenkollesee PLVs plus known examples.

Oomycetes_PLV.gb - Oomycete PLVs gene predictions

Oomycetes_PLV.fasta - Oomycete PLVs (nucleotide)

PLV_MCP_profile_HMM - Profile HMM for PLVs

VIROPHAGE_MCP_profile_HMM - Profile HMM for virophages

Funding