Zebrafish Simulation Data

This project repository contains data from zebrafish simulations of in silico wild-type and mutant patterns generated using the agent-based model from "Volkening A, Sandstede B (2018) Iridophores as a source of robustness in zebrafish stripes and variability in Danio patterns. Nat. Commun. 9(3231)." We provide simulation outputs under the default parameter regime and with different levels of stochastic length scale parameters. We also provide summary measures from simulations from an example parameter study where we vary the long-range interaction scale in melanophore birth. We provide results for wild-type zebrarfish and the pfeffer, nacre, and shady mutations. Authors: Melissa R. McGuirl, Alexandria Volkening, Bjorn Sandstede