2023_Nemertoderma_westbladi_genome

Draft genome of Nemertoderma westbladi, sequenced from a single individual using the Ultra-Low Input DNA protocol and HiFi.

This repository contains intermediate and final files generated during the analyses:

• 01 - Raw assembly (HiFi)
• 02 - Decontaminated assembly (HiFi)
• 03 - Reads mapped to the decontaminated assembly (in BAM format)
• 04 - Decontaminated assembly soft masked (HiFi)
• 05 - Gene models in amino acids (HiFi)
• 06 - Gene models in nucleotides (HiFi)
• 07 - Annotation file (GFF3, HiFi)
• 08 - Annotation file (GTF, HiFi)
• 09 - Result of the repeat annotation (HiFi)
• 10 - BUSCO completeness report, Metazoa (HiFi)
• 11 - BUSCO completeness report, Eukaryota (HiFi)
• 12 - Alignments and genetrees generated during phylogenetic analyses
• 12 - PFAM annotation (HiFi)
• 14 - Result of the orthogroup clustering
• 15 - Fasta file containing all the annotated genes related to the ultrafiltration excretory system
• 16 - Raw assembly (Illumina)
• 17 - Decontaminated assembly (Illumina)
• 18 - Gene models in amino acids (Illumina)
• 19 - Gene models in nucleotides (Illumina)
• 20 - Annotation file (GFF3, Illumina)
• 21 - Annotation file (GTF, Illumina)
• 22 - Result of the repeat annotation (Illumina)
• 23 - BUSCO completeness report, Metazoa (Illumina)
• 24 - BUSCO completeness report, Eukaryota (Illumina)
• 25 - PFAM annotation (Illumina)