2023_Nemertoderma_westbladi_genome

Published on 2023-09-15 - 08:21 by Samuel Abalde

Draft genome of Nemertoderma westbladi, sequenced from a single individual using the Ultra-Low Input DNA protocol and HiFi.

This repository contains intermediate and final files generated during the analyses:

01 - Raw assembly (HiFi)
02 - Decontaminated assembly (HiFi)
03 - Reads mapped to the decontaminated assembly (in BAM format)
04 - Decontaminated assembly soft masked (HiFi)
05 - Gene models in amino acids (HiFi)
06 - Gene models in nucleotides (HiFi)
07 - Annotation file (GFF3, HiFi)
08 - Annotation file (GTF, HiFi)
09 - Result of the repeat annotation (HiFi)
10 - BUSCO completeness report, Metazoa (HiFi)
11 - BUSCO completeness report, Eukaryota (HiFi)
12 - Alignments and genetrees generated during phylogenetic analyses
12 - PFAM annotation (HiFi)
14 - Result of the orthogroup clustering
15 - Fasta file containing all the annotated genes related to the ultrafiltration excretory system
16 - Raw assembly (Illumina)
17 - Decontaminated assembly (Illumina)
18 - Gene models in amino acids (Illumina)
19 - Gene models in nucleotides (Illumina)
20 - Annotation file (GFF3, Illumina)
21 - Annotation file (GTF, Illumina)
22 - Result of the repeat annotation (Illumina)
23 - BUSCO completeness report, Metazoa (Illumina)
24 - BUSCO completeness report, Eukaryota (Illumina)
25 - PFAM annotation (Illumina)

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