Microbiology

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Analysis of the effect of red yeast rice extract based on 16S rRNA sequencing on gut microbiota composition and diversity in high-fat diet mice using raw data

dataset posted on 2025-07-16

Data for "<i>Pseudomonas aeruginosa</i> sense exopolysaccharide trails using type IV pili and adhesins during biofilm formation"

Data for "Pseudomonas aeruginosa sense exopolysaccharide trails using type IV pili and adhesins during biofilm formation"

dataset posted on 2025-07-15

FILES UNDER EMBARGO

Code

software posted on 2025-07-15

Supplemental data and scripts for "Detergent-based separation of microbes from marine particles"

dataset posted on 2025-07-14

Effectiveness of personalized granola tailored to the gut microbiota for improving gut environment and mood states.

Effectiveness of personalized granola tailored to the gut microbiota for improving gut environment and mood states.

dataset posted on 2025-07-13

Cave Metagenome-assembled Genome

dataset posted on 2025-07-13

HCO CyoB subunit alignment (Fasta format)

dataset posted on 2025-07-11

HCO CyoB subunit phylogenetic tree (Newick format)

dataset posted on 2025-07-11

Supporting information for <i>Streptococcus mutans</i> bacterial extracellular vesicle characterization

Supporting information for Streptococcus mutans bacterial extracellular vesicle characterization

dataset posted on 2025-07-10

Sebastian Aguayo

Our first target microbe for Mars, and how we chose it

preprint posted on 2025-07-09

Pioneer Labs Reports

Redesigning Psychiatry - The new era of biotechnology, the microbiome, and translational neuroscience

Redesigning Psychiatry - The new era of biotechnology, the microbiome, and translational neuroscience

journal contribution posted on 2025-07-08

Deivis de Oliveira Guimarães

From Collapse to Control - How Precision Biotechnology and Probiotics Could Redefine the Post-Antibiotic Era

From Collapse to Control - How Precision Biotechnology and Probiotics Could Redefine the Post-Antibiotic Era

journal contribution posted on 2025-07-08

Deivis de Oliveira Guimarães

<b>Temporal Biomarker Discovery via Vitamin D Nuclear Receptor Clearance and Observational Mucosal Pattern Cycling: Hypothesis and Preliminary Observations</b>

Temporal Biomarker Discovery via Vitamin D Nuclear Receptor Clearance and Observational Mucosal Pattern Cycling: Hypothesis and Preliminary Observations

preprint posted on 2025-07-08

Code for: The thrust dynamics of hairy flagella with three-dimensional wave pattern

dataset posted on 2025-07-08 in Technical University of Denmark

ONLINE RESOURCE

cAMP-CRP promotes ColE1 plasmid replication by reducing RNAI stability through transcriptional repression of hfq

online resource posted on 2025-07-08

Micrographs of L. mexicana promastigotes isolated from Lutzomyia longipalpis guts after 9 days post blood infected meal (V-ATPase null mutant, V-ATPase add-back and Parental).

figure posted on 2025-07-07

Measles vaccine virus RNA in children more than 100 days after vaccination - MeV genome.

Measles vaccine virus RNA in children more than 100 days after vaccination - MeV genome.

figure posted on 2025-07-07

Phylogenomics and Gene Neighborhoods

software posted on 2025-07-07

Genomes, MAGs and metagenomes

software posted on 2025-07-04

Colabfold PAE outputs

dataset posted on 2025-07-02

AlphaFold3 predictions files for PfVps16 paper

dataset posted on 2025-07-01

<b>Microbial-Derived Metabolites as Modulators of Host Inflammatory and Metabolic Signaling: </b><b>Mechanisms and Dietary Intervention Strategies</b>

Microbial-Derived Metabolites as Modulators of Host Inflammatory and Metabolic Signaling: Mechanisms and Dietary Intervention Strategies

journal contribution posted on 2025-06-29

<b>Revisiting </b><b>the Cardiovascular Implications of L-Carnitine Metabolism</b><b>: Evidence from Mongolian Pastoralists </b><b>and Experimental Validation</b>

Revisiting the Cardiovascular Implications of L-Carnitine Metabolism: Evidence from Mongolian Pastoralists and Experimental Validation

figure posted on 2025-06-28

Jin-Hua Baoyindugurong

Identification of Antiviral Defense Systems Using PADLOC and DefenseFinder on Annotated Genomes

software posted on 2025-06-27

Metagenome Processing and Annotation Pipeline

software posted on 2025-06-27

REBASE–CDD Protein Annotation

software posted on 2025-06-26

3-year antiviral study of benzalkonium chloride adsorbed onto a polyethylene terephthalate surface

dataset posted on 2025-06-26

Public genomes stats and completeness

software posted on 2025-06-25

Epimicroscopy images of SAR11

Epimicroscopy images of SAR11

dataset posted on 2025-06-25

Data for "Metagenomic analyses reveal three supergroups of Wolbachia in a single genus of feather-feeding lice (Penenirmus)" by Ember B. Clodfelter, Jorge Doña, Kimberly K. O. Walden, and Kevin P. Johnson

dataset posted on 2025-06-24

Placeholder

figure posted on 2025-06-23

Data sets for "Biohydrogen production through dark fermentation of agricultural waste: Novel strain and feedstock characterisation".

dataset posted on 2025-06-23 in Newcastle University

The Deficiency of Chymase Mast Cell Protease 4 Exacerbates DSS -Induced Colitis in Mice (M4+DSS (1234))

dataset posted on 2025-06-21

<b>IDENTIFICATION OF ANTIMICROBIAL Peptides in CLOACAL FLUID FROM LOGGERHEAD TURTLES (</b><b>CARETTA CARETTA</b><b>)</b>

IDENTIFICATION OF ANTIMICROBIAL Peptides in CLOACAL FLUID FROM LOGGERHEAD TURTLES (CARETTA CARETTA)

thesis posted on 2025-06-20 in Purdue University Graduate School

Temitope Mary Jones

Iōtorishima and other Pacific Islands; Palythoa tuberculosa; 16S rRNA data, ASV tables and metadata; Symbiodiniaceae data and metadata

dataset posted on 2025-06-20

Roger Huerlimann

<i>Lacticaseibacillus salsurae</i> sp. nov. and<i> Levilactobacillus muriae</i> sp. nov., isolated from traditional Chinese pickle

Lacticaseibacillus salsurae sp. nov. and Levilactobacillus muriae sp. nov., isolated from traditional Chinese pickle

dataset posted on 2025-06-18 in Microbiology Society

Bacterial and Archaeal Phenotypic Database (BAPdb)

dataset posted on 2025-06-16

<b>Genomic </b><b>Characteristics </b><b>and </b><b>Adaptive Resistance Mechanisms </b><b>of </b><b>Pseudomonas aeruginosa</b><b> Isolates from Non-Cystic Fibrosis Bronchiectasis</b>

Genomic Characteristics and Adaptive Resistance Mechanisms of Pseudomonas aeruginosa Isolates from Non-Cystic Fibrosis Bronchiectasis

figure posted on 2025-06-12

Additional data for publication: "Genomic epidemiology of IMP carbapenemases: an emerging global problem with diverse IMP variants, bacterial host strains and plasmid types"

dataset posted on 2025-06-12

collection:
citrOgen: a synthesis-free polysaccharide and protein antigen-presentation to antibody-induction platform

posted on 2025-06-11