SF
Publications
- Cloud-SPAN/03genomics: Cloud-SPAN Genomics Session 3: Assessing Read Quality then Trimming and Filtering Reads
- Cloud-SPAN/04genomics: Cloud-SPAN Genomics Session 4: Finding Sequence Variants
- The revolution of whole genome sequencing to study parasites
- Whole-genome sequencing of Trypanosoma brucei reveals introgression between subspecies that is associated with virulence
- The genome of the zoonotic malaria parasite Plasmodium simium reveals adaptations to host-switching
- A third generation vaccine for human visceral leishmaniasis and post kala azar dermal leishmaniasis: First-in-human trial of ChAd63-KH
- Early reduction in PD-L1 expression predicts faster treatment response in human cutaneous leishmaniasis
- Chromosomal assembly of the nuclear genome of the endosymbiont-bearing trypanosomatid Angomonas deanei.
- A Leishmania infantum genetic marker associated with miltefosine treatment failure for visceral leishmaniasis
- Tissue and host species-specific transcriptional changes in models of experimental visceral leishmaniasis
- Early reduction in PD-L1 expression predicts faster treatment response in human cutaneous leishmaniasis
- Tissue and host species-specific transcriptional changes in models of experimental visceral leishmaniasis
- Bioinformatics could unlock greater biogas production
- The mRNA-bound Proteome of Leishmania mexicana: Novel Genetic Insight into an Ancient Parasite
- Case Report: The effect of intravenous and oral antibiotics on the gut microbiome and breath volatile organic compounds over one year [version 2; peer review: 1 approved, 1 approved with reservations]
- Hold the best meeting you ever attended
- Multiple targets of balancing selection in Leishmania donovani complex parasites
- Tissue specific dual RNA-seq defines host-parasite interplay in murine visceral leishmaniasis caused by Leishmania donovani and Leishmania infantum
- Leishmania infantum Genotype is a Major Factor in Visceral Leishmaniasis Mortality in Brazil
- Case Report: The effect of intravenous and oral antibiotics on the gut microbiome and breath volatile organic compounds over one year
- Tissue Specific Dual RNA-Seq Defines Host–Parasite Interplay in Murine Visceral Leishmaniasis Caused by Leishmania donovani and Leishmania infantum
- Cloud-SPAN/genomics01-intro:
- Cloud-SPAN/genomics02-proj-mngt-cloud-genomics:
- Tissue-specific transcriptomic changes associated with AmBisome® treatment of BALB/c mice with experimental visceral leishmaniasis [version 1; peer review: 3 approved]
- Experimental Selection of Paromomycin Resistance in Leishmania donovani Amastigotes Induces Variable Genomic Polymorphisms
- 3′Nucleotidase/nuclease is required for Leishmania infantum clinical isolate susceptibility to miltefosine
- Case Report: The effect of intravenous and oral antibiotics on the gut microbiome and breath volatile organic compounds over one year [version 3; peer review: 2 approved]
- The Role of Biomethane in Reaching Net Carbon Zero
- Co-infection of Leishmania infantum and a Crithidia-related species in a case of refractory relapsed visceral leishmaniasis with non-ulcerated cutaneous manifestation in Brazil
- Cloud-SPAN Prenomics: Overview
- Cloud-SPAN Prenomics Session 1. Understanding your file systems + the shell
- Cloud-SPAN Prenomics Session 2. Using the command line
- Cloud-SPAN/00genomics: Cloud-SPAN Genomics Course Overview
- Cloud-SPAN/01genomics: Cloud-SPAN Genomics Session 1: Project Management for Cloud Genomics
- Cloud-SPAN/02genomics: Cloud-SPAN Genomics Session 2: Data Preparation and Organisation
- Cloud-SPAN Metagenomics Course Session 1: QC & Assembly
- Cloud-SPAN Metagenomics Course: Overview
- Cloud-SPAN Metagenomics Course Session 2: Polishing
- Cloud-SPAN Metagenomics Course Session 3: Taxonomic Annotation
- Cloud-SPAN Metagenomics Course Session 4: Binning + Functional Annotation
- Cloud-SPAN Cloud Admin Guide: Overview
- Cloud-SPAN Cloud Admin Guide: Setting Work Environments
- Cloud-SPAN Cloud Admin Guide: Managing AWS Instances
- Implementation of anaerobic digestion for valorizing the organic fraction of municipal solid waste in developing countries: Technical insights from a systematic review
- Cloud-SPAN NERC Metagenomics Course: Overview
- Cloud-SPAN NERC Metagenomics: Files & Directories
- Cloud-SPAN NERC Metagenomics: Files & Directories
- Cloud-SPAN NERC Metagenomics Course: Overview
- Cloud-SPAN NERC Metagenomics Course Lesson 2: Using the Command Line
- Cloud-SPAN NERC Metagenomics Course Lesson 2: Using the Command Line
- Cloud-SPAN NERC Metagenomics Course Lesson 3: QC & Assembly
- Cloud-SPAN NERC Metagenomics Course Lesson 3: QC & Assembly
- Cloud-SPAN NERC Metagenomics Course Lesson 4: Polishing
- Cloud-SPAN NERC Metagenomics Course Lesson 4: Polishing
- Cloud-SPAN NERC Metagenomics Course Session 5: Binning & Functional Annotation
- Cloud-SPAN NERC Metagenomics Course Session 5: Binning & Functional Annotation
- Cloud-SPAN NERC Metagenomics Course Lesson 6: Taxonomic Annotation
- Cloud-SPAN NERC Metagenomics Course Lesson 6: Taxonomic Annotation