José Marcelo Viana

Publications

• Bayesian random regression threshold models for genetic evaluation of pregnancy probability in Red Sindhi heifers
• Efficiency of genome-wide association studies in random cross populations
• Efficiency of genome-wide association studies in random cross populations (vol 37, 2017)
• Efficiency of low heritability QTL mapping under high SNP density
• Quantitative genetics theory for genomic selection and efficiency of genotypic value prediction in open-pollinated populations
• Genomic selection for plant breeding with different population structures
• Population structure correction for genomic selection through eigenvector covariates
• Relevance of genetic relationship in GWAS and genomic prediction
• Uncovering the transcriptional response of popcorn (Zea mays L. var. everta) under long-term aluminum toxicity
• Efficiency of Bayesian quantitative trait loci mapping with full‐sib progeny
• New insights into genomic selection through population-based non-parametric prediction methods
• The impact of epistasis in the heterosis and combining ability analyses
• Deciphering the major metabolic pathways associated with aluminum tolerance in popcorn roots using label-free quantitative proteomics
• Significance of linkage disequilibrium and epistasis on genetic variances in noninbred and inbred populations
• Linkage disequilibrium, SNP frequency change due to selection, and association mapping in popcorn chromosome regions containing QTLs for quality traits
• Ridge, Lasso and Bayesian additive-dominance genomic models
• Efficiency of genomic prediction of non-assessed single crosses
• Bayesian estimation of genetic parameters for individual feed conversion and body weight gain in meat quail
• New accuracy estimators for genomic selection with application in a cassava (Manihot esculenta) breeding program
• Genetic diversity and path analysis for nitrogen use efficiency of tropical popcorn (Zea mays ssp. everta ) inbred lines in adult stage
• Early evaluation of popcorn hybrids for vegetative use efficiency of nitrogen and phosphorus and secondary traits
• A note on transgenerational epigenetics affecting egg quality traits in meat-type quail
• Efficiency of genomic prediction of nonassessed testcrosses
• Triple categorical regression for genomic selection: Application to cassava breeding
• Generation mean analysis for nitrogen and phosphorus uptake, utilization, and translocation indexes at vegetative stage in tropical popcorn
• Genomic evaluation for novel stayability traits in Nellore cattle
• Bayesian model combining linkage and linkage disequilibrium analysis for low density-based genomic selection in animal breeding
• Regularized quantile regression applied to genome-enabled prediction of quantitative traits
• Available phosphorus levels in diets for pigs from 15 to 30kg,Níveis de fósforo disponível em dietas para suínos dos 15 aos 30kg
• Identification of contrasting tropical popcorn inbreds for studying aluminum toxicity tolerance inheritance
• The impact of epistasis in the heterosis and combining ability analyses
• The impact of linkage disequilibrium and epistasis in the studies of inheritance based on Hayman’s diallel and generation mean analysis
• The impact of epistasis in the heterosis and combining ability analyses
• Factors affecting heterotic grouping with cross‐pollinating crops
• The impact of linkage disequilibrium and epistasis in the studies of inheritance based on Hayman’s diallel and generation mean analysis
• Efficiency of genome-wide association study in random cross populations
• Relative efficiency of the genotypic value and combining ability effects on reciprocal recurrent selection
• Best linear unbiased prediction for genetic evaluation in reciprocal recurrent selection with popcorn populations
• Bayesian inference of mixed models in quantitative genetics of crop species
• Early evaluation of popcorn inbred lines for phosphorus use efficiency
• Efficacy of population structure analysis with breeding populations and inbred lines
• Genetic diversity and path analysis for nitrogen use efficiency in popcorn inbred lines
• Population structure and genetic diversity of maize inbreds derived from tropical hybrids
• Inferring tropical popcorn gene pools based on molecular and phenotypic data
• Supervised independent component analysis as an alternative method for genomic selection in pigs
• Genomic growth curves of an outbred pig population
• Combining ability for common bacterial blight resistance in snap and dry bean (phaseolus vulgaris L.),Capacidade de combinação para resistência ao crestamento bacteriano em feijão comum e feijão-de-vagem (Phaseolus vulgaris L.)
• Sire evaluation for total number born in pigs using a genomic reaction norms approach
• Quantitative genetics theory for genomic selection and efficiency of breeding value prediction in open-pollinated populations
• Linkage disequilibrium and haplotype block patterns in popcorn populations
• Dominance, epistasis, heritabilities and expected genetic gains
• Erratum: The parametric restrictions of the Gardner and Eberhart diallel analysis model: Heterosis analysis (Genetics and Molecular Biology (2000) vol. 23 (4) (877-881))
• Estimation of genetic parameters in the analysis of square lattice experiment group
• Erratum: The parametric restrictions of the Griffing diallel analysis model: Combining ability analysis (Genetics and Molecular Biology (2000) vol. 23 (4) (877-881))
• The parametric restrictions of the Griffing diallel analysis model: Combining ability analysis
• A note on accuracy of Bayesian LASSO regression in GWS
• Adaptability and stability of popcorn populations related through selection cycles,Adaptabilidade e estabilidade de populações de milho-pipoca relacionadas por ciclos de seleção
• Variance component estimation with longitudinal data: A simulation study with alternative methods,Estimação de componentes de variância com dados longitudinais: Um estudo de simulação com métodos alternativos
• Selection of popcorn inbred lines based on performance and genealogy of S5 progenies and plants,Seleção de linhagens de milho-pipoca, considerando desempenho e genealogia de progênies e plantas S5
• Evaluation of coffee progenies from crosses of Catuaí vermelho and Catuaí amarelo with "Hibrido de Timor" descents,Avaliação de progênies obtidas de cruzamentos de descendentes do Híbrido de Timor com as cultivares Catuaí vermelho e Catuaí amarelo
• Methods of longitudinal data analysis for the genetic improvement of sugar apple,Métodos de análise de dados longitudinais para o melhoramento genético da pinha
• Popping expansion tests in popcorn breeding programs,Testes de capacidade de expansão em programas de melhoramento de milho pipoca
• Best Linear Unbiased Prediction and Family Selection in Crop Species (vol 51, pg 2371, 2011)
• Combined selection of progeny in crop breeding using best linear unbiased prediction
• BLUP for genetic evaluation of plants in non-inbred families of annual crops
• Best Linear Unbiased Prediction and Family Selection in Crop Species
• Multi-trait BLUP in half-sib selection of annual crops
• Selection of popcorn s(5) inbred lines based on performance and genetic divergence.
• Relevance of Pedigree, Historical Data, Dominance, and Data Unbalance for Selection Efficiency
• Combining ability for morphoagronomic traits in common bean and snap bean
• Genetic evaluation of inbred plants based on BLUP of breeding value and general combining ability
• Bias in the prediction of genetic gain due to mass and half-sib selection in random mating populations
• RELATIVE EFFICIENCIES OF BETWEEN AND WITHIN HALF-SIB FAMILIES SELECTION PROCESSES IN A POPCORN POPULATION
• Quantitative genetics theory for non-inbred populations in linkage disequilibrium
• Estimation of genetic parameters in the square lattice analysis
• Adaptability and stability patterns in endogamic hybrid maize families, obtained by the cryptic hybrids method,Adaptabilidade e estabilidade de híbridos de famílias endogâmicas de milho, obtidos pelo método dos híbridos crípticos
• Theory and analysis of partial diallel crosses
• Breeding strategies for recurrent selection of maize
• Heterosis and combining ability analyses from the partial diallel
• Biometrical analyses of linolenic acid content of soybean seeds
• Inbreeding depression simulation in popcorn cultivars to estimate the effective population size for germplasm conservation
• Analysis of variance of partial diallel tables
• Relative importance of per se and topcross performance in the selection of popcorn S3 families
• Analysis of experiments in square lattice with emphasis on variance components. II. Joint analysis,Análise de experimentos em látice quadrado com ênfase em componentes de variância.: II. Análise conjunta
• The parametric restrictions of the Gardner and Eberhart diallel analysis model: Heterosis analysis
• A methodology of genetic divergence analysis based on sample unit projection on two-dimensional space
• Genetic divergence in sugar cane (Saccharum spp.) clones
• Inbreeding depression and genetic components for popping expansion and other traits in Brazilian populations of popcorn,Depresión endogámica y componentes genéticos en poblaciones Brasileras de maíz-roseta
• Analysis of general and specific combining abilities of popcorn populations, including selfed parents
• Genetic evaluation of tropical popcorn inbred lines using BLUP
• Components of variation of polygenic systems with digenic epistasis
• Generation mean analysis in relation to polygenic systems with epistasis and fixed genes
• Combined selection in early generation testing of self-pollinated plants
• Genetic parameters relating isoflavone and protein content in soybean seeds
• Efficiency in selecting S1 and S2 popcorn progenies for development of inbred lines,Eficiência da seleção de progênies S1 e S2 de milho-pipoca, visando à produção de linhagens
• Analysis of experiments in square lattice with emphasis on variance components. I. Individual analysis,Análise de experimentos em látice quadrado com ênfase em componentes de variância. I. Análises individuais
• Association of performance among S3 families and topcross hybrids of popcorn,Associação de desempenho entre famílias S3 e seus híbridos topcross de milho-pipoca
• Relative efficiencies of selection methods of inbred families inpopcorn,Eficiências relativas de métodos de seleção de famílias endogâmicas em milho-pipoca
• Reciprocal recurrent selection to obtain interpopulation hybrids of popcorn,Seleção recorrente recíproca na obtenção de híbridos interpopulacionais de milho-pipoca
• Comparative Analysis of Pedigree-Based BLUP and Phenotypic Mass Selection for Developing Elite Inbred Lines, Based on Field and Simulated Data
• Efficiency of mapping epistatic quantitative trait loci
• Genetic diversity and path analysis for nitrogen use efficiency of tropical popcorn (Zea mays ssp. everta) inbred lines in adult stage
• A simulation-based assessment of the efficiency of QTL mapping under environment and genotype x environment interaction effects
• Characterization of temperate and tropical popcorn populations and GWAS for zeins and starch contents
• Population size in QTL detection using quantile regression in genome-wide association studies
• Tolerance mechanisms to aluminum in popcorn inbred lines involving aluminum compartmentalization and ascorbate-glutathione redox pathway
• Methods of analysis of longitudinal data for the genetic improvement of sugar apple, vol 46, pg 1657, 2011
• Efficiency in selecting S1 and S2 popcorn progenies for development of inbred lines,Eficiência da seleção de progênies S1 e S2 de milho-pipoca, visando à produção de linhagens
• The parametric restrictions of the Gardner and Eberhart diallel analysis model: Heterosis analysis (vol 23, pg 877, 2000)
• Selection of popcorn inbred lines based on performance and genealogy of S-5 progenies and plants
• PROTON SPIN-LATTICE RELAXATION IN TMMC
• Brachiaria brizantha control using glyphosate for tifton 85 (Cynodon spp.) pasture formation
• Adaptability and stability patterns in endogamic hybrid maize families, obtained by the cryptic hybrids method
• The parametric restrictions of the Griffing diallel analysis model: combining ability analysis
• Variance component estimation with longitudinal data: a simulation study with alternative methods
• A METHODOLOGY OF GENETIC-DIVERGENCE ANALYSIS BASED ON SAMPLE UNIT PROJECTION ON 2-DIMENSIONAL SPACE
• The parametric restrictions of the Gardner and Eberhart diallel analysis model: heterosis analysis
• Relative efficiencies of selection methods of inbred families in popcorn
• GENETIC-DIVERGENCE IN SUGAR-CANE (SACCHARUM SPP) CLONES
• Adaptability and stability of popcorn populations related through selection cycles
• Association of performance among S-3 families and topcross hybrids of popcorn
• The parametric restrictions of the Griffing diallel analysis model: Combining ability analysis (vol 23, pg 877, 2000)
• ANÁLISE DE EXPERIMENTOS EM LÁTICE QUADRADO COM ÊNFASE EM COMPONENTES DE VARIÂNCIA: II. ANÁLISE CONJUNTA
• Heritability at family mean level
• Relative importance of per se and topcross performance in the selection of popcorn S-3 families