Jeffrey Ross-Ibarra

Publications

• Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution DOI: 10.1186/gb-2013-14-1-r10
• Comparative population genomics of maize domestication and improvement DOI: 10.1038/ng.2309
• Crop genomics: Advances and applications DOI: 10.1038/nrg3097
• Genetic architecture of maize kernel composition in the nested association mapping and inbred association panels DOI: 10.1104/pp.111.185033
• Historical genomics of North American maize DOI: 10.1073/pnas.1209275109
• Maize HapMap2 identifies extant variation from a genome in flux DOI: 10.1038/ng.2313
• Megabase-scale inversion polymorphism in the wild ancestor of maize DOI: 10.1534/genetics.112.138578
• Reshaping of the maize transcriptome by domestication DOI: 10.1073/pnas.1201961109
• Teosinte as a model system for population and ecological genomics DOI: 10.1016/j.tig.2012.08.004
• Genetic signals of origin, spread, and introgression in a large sample of maize landraces DOI: 10.1073/pnas.1013011108
• Genome size and transposable element content as determined by high-throughput sequencing in maize and Zea luxurians DOI: 10.1093/gbe/evr008
• Identification of a functional transposon insertion in the maize domestication gene tb1 DOI: 10.1038/ng.942
• Influence of cryptic population structure on observed mating patterns in the wild progenitor of maize (Zea mays ssp. parviglumis) DOI: 10.1111/j.1365-294X.2010.04924.x
• A role for nonadaptive processes in plant genome size evolution? DOI: 10.1111/j.1558-5646.2010.00967.x
• Fine scale genetic structure in the wild ancestor of maize (Zea mays ssp. parviglumis) DOI: 10.1111/j.1365-294X.2010.04559.x
• Genetic diversity in a crop metapopulation DOI: 10.1038/hdy.2009.110
• Indel-associated mutation rate varies with mating system in flowering plants DOI: 10.1093/molbev/msp249
• Patterns of population structure and environmental associations to aridity across the range of loblolly pine (Pinus taeda L., Pinaceae) DOI: 10.1534/genetics.110.115543
• Reproductive biology of macleania rupestris (ericaceae), a pollen-limited neotropical cloud-forest species in Costa Rica DOI: 10.1017/S0266467410000064
• Widespread gene conversion in centromere cores DOI: 10.1371/journal.pbio.1000327
• A first-generation haplotype map of maize DOI: 10.1126/science.1177837
• A pleistocene clone of palmer's oak persisting in Southern California DOI: 10.1371/journal.pone.0008346
• Historical divergence and gene flow in the genus Zea DOI: 10.1534/genetics.108.097238
• Selection on grain shattering genes and rates of rice domestication DOI: 10.1111/j.1469-8137.2009.02984.x
• Demography and weak selection drive patterns of transposable element diversity in natural populations of Arabidopsis lyrata DOI: 10.1073/pnas.0804671105
• Multiple domestications do not appear monophyletic DOI: 10.1073/pnas.0809042105
• Patterns of polymorphism and demographic history in natural populations of Arabidopsis lyrata DOI: 10.1371/journal.pone.0002411
• Selection on major components of angiosperm genomes DOI: 10.1126/science.1153586
• Genome size and recombination in angiosperms: A second look DOI: 10.1111/j.1420-9101.2006.01275.x
• Plant domestication, a unique opportunity to identify the genetic basis of adaptation DOI: 10.1073/pnas.0700643104
• Mitochondrial DNA and population size [4] DOI: 10.1126/science.314.5804.1388
• Quantitative trait loci and the study of plant domestication DOI: 10.1007/s10709-004-2744-6
• The Evolution of Recombination under Domestication: A Test of Two Hypotheses DOI: 10.1086/380606
• Origin and domestication of the chaya (Cnidoscolus aconitifolius Mill I. M. Johnst): The Mayan spinach | Origen y domesticación de la chaya (Cnidoscolus aconitifolius Mill I. M. Johnst): La espinaca Maya DOI: 10.1525/msem.2003.19.2.287
• Genetic Data Analysis II. Methods for Discrete Population Genentic Data DOI: 10.1663/0013-0001(2002)056[0216:GDAIMF]2.0.CO;2
• The ethnobotany of chaya (Cnidoscolus aconitifolius ssp. aconitifolius Breckon): A nutritious Maya vegetable
• Implications of mating patterns for conservation of the endangered plant Eriogonum ovalifolium var. vineum (Polygonaceae)
• Using Nextgen Sequencing to Investigate Genome Size Variation and Transposable Element Content DOI: 10.1007/978-3-642-31842-9_3