figshare
Browse

Jamie M. Kass

Associate Professor (Ecology; Biogeography and phylogeography; Modelling and simulation)

Sendai, Japan

Associate professor, PI of Macroecology Lab at Graduate School of Life Sciences, Tohoku University.

HP: https://macroecolab.github.io/

Publications

  • Randomization analyses in niche and distribution modeling
  • ENMeval: an R package for conducting spatially independent evaluations and estimating optimal model complexity for Maxent ecological niche models
  • Revised distributional estimates for the recently discovered olinguito (Bassaricyon neblina), with comments on natural and taxonomic history
  • Toward ecologically realistic predictions of species distributions: a cross-time example from tropical montane cloud forests
  • Disentangling the genetic effects of refugial isolation and range expansion in a trans-continentally distributed species
  • Code sharing increases citations, but remains uncommon
  • Better incentives are needed to reward academic software development
  • wallace 2: a shiny app for modeling species niches and distributions redesigned to facilitate expansion via module contributions
  • Dynamic distribution modelling of the swamp tigertail dragonfly Synthemis eustalacta (Odonata: Anisoptera: Synthemistidae) over a 20‐year bushfire regime
  • Incorporating sampling bias into permutation tests for niche and distribution models
  • Lineage‐level distribution models lead to more realistic climate change predictions for a threatened crayfish
  • Differences in factors determining taxon-based and trait-based community structures: a field test using zooplankton
  • Climate change refugia for biodiversity in the Klamath-Siskiyou Ecoregion
  • Idea paper: Improving forecasts of community composition with lightweight biodiversity monitoring across ecological and anthropogenic disturbance gradients
  • Operationalizing expert knowledge in species' range estimates using diverse data types
  • Improving area of occupancy estimates for parapatric species using distribution models and support vector machines
  • The global distribution of known and undiscovered ant biodiversity
  • A large‐scale assessment of ant diversity across the Brazilian Amazon Basin: integrating geographic, ecological and morphological drivers of sampling bias
  • Polychlorinated biphenyls in the exterior caulk of San Francisco Bay Area buildings, California, USA
  • ENM2020: A Free Online Course and Set of Resources on Modeling Species' Niches and Distributions
  • changeRangeR: An R package for reproducible biodiversity change metrics from species distribution estimates
  • occCite: Tools for querying and managing large biodiversity occurrence datasets
  • Explainable artificial intelligence enhances the ecological interpretability of black‐box species distribution models
  • Species' range model metadata standards: RMMS
  • Wallace: A flexible platform for reproducible modeling of species niches and distributions built for community expansion
  • A new null model approach to quantify performance and significance for ecological niche models of species distributions
  • Biotic predictors with phenological information improve range estimates for migrating monarch butterflies in Mexico
  • Co-occurrence of invasive and native carnivorans affects occupancy patterns across environmental gradients
  • Common ant species dominate morphospace: unraveling the morphological diversity in the Brazilian Amazon Basin
  • Temporal matching of occurrence localities and forest cover data helps improve range estimates and predict climate change vulnerabilities
  • ENMeval 2.0: Redesigned for customizable and reproducible modeling of species’ niches and distributions
  • Intraspecific genetic variation matters when predicting seagrass distribution under climate change
  • Global biogeographic regions for ants have complex relationships with those for plants and tetrapods
  • Biodiversity modeling advances will improve predictions of nature’s contributions to people
  • Genomic and environmental insights and conservation challenges for two hybridizing iconic crocodile species across Mexico: Crocodylus acutus and C. moreletii
  • Global determinants of insect mitochondrial genetic diversity
  • Breakdown in seasonal dynamics of subtropical ant communities with land-cover change
  • Geographic and climatic constraints on bioregionalization of European ants
  • Linking ecological niche models and common garden experiments to predict phenotypic differentiation in stressful environments: Assessing the adaptive value of marginal populations in an alpine plant
  • Code sharing in ecology and evolution increases citation rates but remains uncommon
  • Achieving higher standards in species distribution modeling by leveraging the diversity of available software
  • Differences in factors determining taxon‐based and trait‐based community structures: a field test using zooplankton
  • National-Scale Terrestrial Biodiversity and Ecosystem Monitoring with Essential Biodiversity Variables in Japan and Finland
  • Differences in predictions of marine species distribution models based on expert maps and opportunistic occurrences
  • Long‐Term Human Land‐Use Change Throughout Southeast Asia Reshapes the Distribution of Suitable Habitat for a Human‐Commensal Bird Species

Jamie M. Kass's public data