Dora Tombacz

Publications

• In-Depth Temporal Transcriptome Profiling of an Alphaherpesvirus Using Nanopore Sequencing
• Visible Light-Generated Antiviral Effect on Plasmonic Ag-TiO2-Based Reactive Nanocomposite Thin Film
• An Integrated Sequencing Approach for Updating the Pseudorabies Virus Transcriptome
• Combined nanopore and single-molecule real-time sequencing survey of human betaherpesvirus 5 transcriptome
• Time-Course Transcriptome Profiling of a Poxvirus Using Long-Read Full-Length Assay
• Time course profiling of host cell response to herpesvirus infection using nanopore and synthetic long-read transcriptome sequencing
• Time-course transcriptome analysis of host cell response to poxvirus infection using a dual long-read sequencing approach
• Dynamic Transcriptome Sequencing of Bovine Alphaherpesvirus Type 1 and Host Cells Carried Out by a Multi-Technique Approach
• Combined Short and Long-Read Sequencing Reveals a Complex Transcriptomic Architecture of African Swine Fever Virus
• Long-read assays shed new light on the transcriptome complexity of a viral pathogen
• Pinealocytes can not transport neurotropic viruses. Pinealo-to-retinal connection in prepubertal rats originates from pineal neurons: Light and electron microscopic immunohistochemical studies
• The Same Magnocellular Neurons Send Axon Collaterals to the Posterior Pituitary and Retina or to the Posterior Pituitary and Autonomic Preganglionic Centers of the Eye in Rats
• Time-course profiling of bovine alphaherpesvirus 1.1 transcriptome using multiplatform sequencing
• Short and Long-Read Sequencing Survey of the Dynamic Transcriptomes of African Swine Fever Virus and the Host Cells
• Meta-analytic approach for transcriptome profiling of herpes simplex virus type 1
• Long-read sequencing uncovers a complex transcriptome topology in varicella zoster virus.
• Novel classes of replication-associated transcripts discovered in viruses.
• Template-switching artifacts resemble alternative polyadenylation.
• Third-generation Sequencing Reveals Extensive Polycistronism and Transcriptional Overlapping in a Baculovirus.
• Multiple Long-Read Sequencing Survey of Herpes Simplex Virus Dynamic Transcriptome.
• Lytic Transcriptome Dataset of Varicella Zoster Virus Generated by Long-Read Sequencing.
• Analysis of the Complete Genome Sequence of a Novel, Pseudorabies Virus Strain Isolated in Southeast Europe.
• Transcriptomic study of Herpes simplex virus type-1 using full-length sequencing techniques.
• Long-Read Sequencing - A Powerful Tool in Viral Transcriptome Research.
• Whole-exome sequencing data of suicide victims who had suffered from major depressive disorder
• Full Genome Sequence of the Western Reserve Strain of Vaccinia Virus Determined by Third-Generation Sequencing.
• Long-Read Sequencing Revealed an Extensive Transcript Complexity in Herpesviruses.
• Transcriptome-wide survey of pseudorabies virus using next- and third-generation sequencing platforms.
• Evaluation of whole exome sequencing as an alternative to BeadChip and whole genome sequencing in human population genetic analysis.
• Corrigendum: Long-read sequencing of the human cytomegalovirus transcriptome with the pacific biosciences RSII platform.
• Transcriptome-wide analysis of a baculovirus using nanopore sequencing.
• Dynamic transcriptome profiling dataset of vaccinia virus obtained from long-read sequencing techniques.
• Dual Platform Long-Read RNA-Sequencing Dataset of the Human Cytomegalovirus Lytic Transcriptome.
• Multiplatform next-generation sequencing identifies novel RNA molecules and transcript isoforms of the endogenous retrovirus isolated from cultured cells.
• Long-read sequencing of the human cytomegalovirus transcriptome with the Pacific Biosciences RSII platform.
• Long-Read Sequencing of Human Cytomegalovirus Transcriptome Reveals RNA Isoforms Carrying Distinct Coding Potentials.
• Long-Read Sequencing Reveals a GC Pressure during the Evolution of Porcine Endogenous Retrovirus.
• High-Coverage Whole-Exome Sequencing Identifies Candidate Genes for Suicide in Victims with Major Depressive Disorder.
• Long-Read Isoform Sequencing Reveals a Hidden Complexity of the Transcriptional Landscape of Herpes Simplex Virus Type 1.
• Evaluation of the impact of ul54 gene-deletion on the global transcription and DNA replication of pseudorabies virus.
• Multi-platform analysis reveals a complex transcriptome architecture of a circovirus.
• Deletion of the us7 and us8 genes of pseudorabies virus exerts a differential effect on the expression of early and late viral genes.
• Single-nuclei isoform RNA sequencing unlocks barcoded exon connectivity in frozen brain tissue
• Dual isoform sequencing reveals complex transcriptomic and epitranscriptomic landscapes of a prototype baculovirus
• Transcriptome dataset of six human pathogen RNA viruses generated by nanopore sequencing
• High temporal resolution Nanopore sequencing dataset of SARS-CoV-2 and host cell RNAs
• High-Spatiotemporal-Resolution Nanopore Sequencing of SARS-CoV-2 and Host Cell RNAs
• Interactions between the transcription and replication machineries regulate the RNA and DNA synthesis in the herpesviruses.
• Integrative profiling of Epstein–Barr virus transcriptome using a multiplatform approach
• Nanopore Assay Reveals Cell-Type-Dependent Gene Expression of Vesicular Stomatitis Indiana Virus and Differential Host Cell Response
• Full-Length Isoform Sequencing Reveals Novel Transcripts and Substantial Transcriptional Overlaps in a Herpesvirus
• Strain Kaplan of Pseudorabies Virus Genome Sequenced by PacBio Single-Molecule Real-Time Sequencing Technology.
• Genetic Adaptation of Porcine Circovirus Type 1 to Cultured Porcine Kidney Cells Revealed by Single-Molecule Long-Read Sequencing Technology.
• Multi-Platform Sequencing Approach Reveals a Novel Transcriptome Profile in Pseudorabies Virus.
• Characterization of the Dynamic Transcriptome of a Herpesvirus with Long-read Single Molecule Real-Time Sequencing.
• The effects of viral load on pseudorabies virus gene expression.
• Hybrid Sequencing Reveals Novel Features in the Transcriptomic Organization of Equid Alphaherpesvirus 1
• Herpesvirus-mediated delivery of a genetically encoded fluorescent ca 2+ sensor to canine cardiomyocytes
• Ex vivo infection of human embryonic spinal cord neurons prior to transplantation into adult mouse cord
• Genetically timed, activity-sensor and rainbow transsynaptic viral tools
• Whole-genome analysis of pseudorabies virus gene expression by real-time quantitative RT-PCR assay
• Location of parotid preganglionic neurons in the inferior salivatory nucleus and their relation to the superior salivatory nucleus of rat
• Characterization of novel transcripts in pseudorabies virus
• Effects of deletion of the early protein 0 gene of pseudorabies virus on the overall viral gene expression
• The ICP22 protein selectively modifies the transcription of different kinetic classes of pseudorabies virus genes
• Deletion of the virion host shut-off gene of pseudorabies virus results in selective upregulation of the expression of early viral genes in the late stage of infection
• Characterization of pseudorabies virus transcriptome by Illumina sequencing