DS
Domenico Scaramozzino
Cancerfonden Postdoctoral Fellow (Biological physics; Bioinformatic methods development; Bioinformatics and computational biology not elsewhere classified; Structural biology (incl. macromolecular modelling); Structural dynamics)
Stockholm, Sweden
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Publications
- Geometrically nonlinear behavior of lattice domes coupled with local Eulerian instability
- Numerical Evaluation of Protein Global Vibrations at Terahertz Frequencies by Means of Elastic Lattice Models
- Protein Fluctuations in Response to Random External Forces
- Hd-ANM a Computationally Efficient, Highly Customizable and Comprehensive Elastic Network Model
- Generating Protein Ensembles by Applying Forces to an Improved Elastic Network Model
- Protein Conformational Changes and Low-Frequency Vibrational Modes: A Similarity Analysis
- Terahertz Protein Vibrations: The Usefulness of Coarse-Grained Numerical Models
- A finite-element-based coarse-grained model for global protein vibration
- A matrix-based method for the structural analysis of diagrid systems
- Protein Conformational Changes: What Can Geometric Nonlinear Analysis Tell Us?
- Exploring THz Protein Vibrations by Means of Modal Analysis: All-Atom vs Coarse-Grained Model
- Diagrid systems coupled with closed- and open-section shear walls: Optimization of geometrical characteristics in tall buildings
- Influence of the geometrical shape on the structural behavior of diagrid tall buildings under lateral and torque actions
- Structural compliance: A new metric for protein flexibility
- New Trends Towards Enhanced Structural Efficiency and Aesthetic Potential in Tall Buildings: The Case of Diagrids
- Optimization of diagrid geometry based on the desirability function approach
- Selection of the optimal diagrid patterns in tall buildings within a multi-response framework: Application of the desirability function
- hdANM: a new comprehensive dynamics model for protein hinges
- Special Issue on “Computational Approaches for Protein Dynamics and Function”
- Diagrid and Hexagrid Structures: New Perspectives in Design of Tall Buildings
- Modal Analysis of the Lysozyme Protein Considering All-Atom and Coarse-Grained Finite Element Models
- New Trends Towards Enhanced Structural Efficiency and Aesthetic Potential in Tall Buildings: The Case of Diagrids
- Low-Frequency Harmonic Perturbations Drive Protein Conformational Changes
- Breaking the size limit: efficient sampling of large-scale transition pathways and intermediate conformations in sub-mesoscopic protein complexes