BL
Publications
- Additional evaluations show that specific BWA‐aln settings still outperform BWA‐mem for ancient DNA data alignment
- Ancient DNA of northern China Hystricidae sub-fossils reveals the evolutionary history of old world porcupines in the Late Pleistocene
- Using Ancient DNA Analysis and Radiocarbon Dating to Determine the Provenance of an Unusual Whaling Artifact
- Equitable Expanded Carrier Screening Needs Indigenous Clinical and Population Genomic Data
- The genetic origins and impacts of historical Papuan migrations into Wallacea
- Human Genetic Research in Wallacea and Sahul: Recent Findings and Future Prospects
- The immunogenetic impact of European colonization in the Americas
- A 1000-year-old case of Klinefelter's syndrome diagnosed by integrating morphology, osteology, and genetics
- Ethics of DNA research on human remains: five globally applicable guidelines
- Ancient mitochondrial genomes from the Argentinian Pampas inform the early peopling of the Southern Cone of South America
- Stochastic models support rapid peopling of Late Pleistocene Sahul
- Ten millennia of hepatitis B virus evolution.
- Runes from Lány (Czech Republic) - The oldest inscription among Slavs. A new standard for multidisciplinary analysis of runic bones
- Systematic benchmark of ancient DNA read mapping
- Genozip 14 - advances in compression of BAM and CRAM files
- Genozip Dual-Coordinate VCF format enables efficient genomic analyses and alleviates liftover limitations
- Binding affinities of 438 HLA proteins to complete proteomes of seven pandemic viruses and distributions of strongest and weakest HLA peptide binders in populations worldwide
- Ancient DNA from an extinct Mediterranean micromammal— Hypnomys morpheus (Rodentia: Gliridae)—Provides insight into the biogeographic history of insular dormice
- Ancient DNA Reconstructs the Genetic Legacies of Precontact Puerto Rico Communities
- A Paleogenomic Reconstruction of the Deep Population History of the Andes
- More Arrows in the Ancient DNA Quiver: Use of Paleoepigenomes and Paleomicrobiomes to Investigate Animal Adaptation to Environment
- Ancient DNA helps trace the peopling of the world
- A strategy for building and using a human reference pangenome
- Deep FASTQ and BAM co-compression in Genozip 15
- Individuals with Inflammatory Bowel Disease Have an Altered Gut Microbiome Composition of Fungi and Protozoa
- Mitogenomes Reveal Two Major Influxes of Papuan Ancestry across Wallacea Following the Last Glacial Maximum and Austronesian Contact
- Sedimentary ancient DNA from caves: Challenges and opportunities
- Allelic bias when performing in‐solution enrichment of ancient human DNA
- Equity, diversity, and inclusion at the Global Alliance for Genomics and Health
- Paleogenomic study of the Mexican past
- genozip: a fast and efficient compression tool for VCF files
- Ancient genomes reveal over two thousand years of dingo population structure
- Exploring the Potential of Genome-Wide Hybridization Capture Enrichment for Forensic DNA Profiling of Degraded Bones
- More than dirt
- Ancient DNA Studies in Pre-Columbian Mesoamerica
- A Multidisciplinary Review of the Inka Imperial Resettlement Policy and Implications for Future Investigations
- Genozip: a universal extensible genomic data compressor
- The landscape of genomic structural variation in Indigenous Australians
- Shrouded in history: Unveiling the ways of life of an early Muslim population in Santarém, Portugal (8th– 10th century AD)
- Benchmarking Imputed Low Coverage Genomes in a Human Population Genetics Context
- Cases of trisomy 21 and trisomy 18 among historic and prehistoric individuals discovered from ancient DNA
- Biological sex estimation using ancient DNA in Classic Maya contexts
- Millennial processes of population decline, range contraction and near extinction of the European bison
- Environmental conditions associated with initial northern expansion of anatomically modern humans
- Ancient DNA and morphometrics reveal a new species of extinct insular shelduck from Rekohu Chatham Islands
- A strategy for building and using a human reference pangenome
- Widespread male sex bias in mammal fossil and museum collections
- Spatiotemporal landscape genetics
- Filtering out the noise Metagenomic classifiers optimise ancient DNA mapping
- The genetic origins and impacts of historical Papuan migrations into Wallacea
- Preliminary ancient DNA screening results from first to eighth century AD sites in Samtavro and Tchkantiskedi, Georgia
- Progress and prospects in rat genetics: a community view
- High-resolution analysis of cytosine methylation in ancient DNA
- From the field to the laboratory
- Population size history from short genomic scaffolds: how short is too short?
- Data-sharing for indigenous peoples
- Race in a genome: long read sequencing, ethnicity-specific reference genomes and the shifting horizon of race
- El ADN antiguo y la historia del poblamiento temprano del oeste de Sudamérica: lo que hemos aprendido y hacia dónde vamos
- Early cave art and ancient DNA record the origin of European bison
- Molecular phylogeny, biogeography, and habitat preference evolution of Marsupials
- Chromosome Y variants from different inbred mouse strains are linked to differences in the morphologic and molecular responses of cardiac cells to postpubertal testosterone
- Ancient mitochondrial genomes clarify the evolutionary history of New Zealand's enigmatic acanthisittid wrens
- Genetic studies of the peopling of the Americas
- Ethnic and mouse strain differences in central corneal thickness and association with pigmentation phenotype
- Parallel palaeogenomic transects reveal complex genetic history of early European farmers
- A re-appraisal of the early Andean human remains from Lauricocha in Peru
- Ancient mitochondrial DNA provides high-resolution time scale of the peopling of the Americas
- AmericaPlex26
- Cardiac mass and cardiomyocyte size are governed by different genetic loci on either autosomes or chromosome Y in recombinant inbred mice
- Differential gene expression profiling of orbital adipose tissue in thyroid orbitopathy
- Iron Age and Anglo-Saxon genomes from East England reveal British migration history
- Genome-wide patterns of selection in 230 ancient Eurasians
- Experimental conditions improving in-solution target enrichment for ancient DNA
- Megafaunal isotopes reveal role of increased moisture on rangeland during late Pleistocene extinctions
- Genome of the Tasmanian tiger provides insights into the evolution and demography of an extinct marsupial carnivore
- Ancient DNA Analysis Suggests Negligible Impact of the Wari Empire Expansion in Peru's Central Coast during the Middle Horizon
- Mitochondrial genome sequencing in mesolithic North East Europe unearths a new sub-clade within the broadly distributed human haplogroup C1
- The origin and phylogenetic relationships of the New Zealand ravens
- Arrival routes of first Americans uncertain
- A paleogenetic perspective on the early population history of the high altitude Andes
- Ancient DNA reveals elephant birds and kiwi are sister taxa and clarifies ratite bird evolution
- Dual Linkage of a Locus to Left Ventricular Mass and a Cardiac Gene Co-Expression Network Driven by a Chromosome Domain
- Climate change underlies global demographic, genetic, and cultural transitions in pre-Columbian southern Peru
- Ancient mitochondrial genome reveals unsuspected taxonomic affinity of the extinct Chatham duck (Pachyanas chathamica) and resolves divergence times for New Zealand and sub-Antarctic brown teals
- Human evolution
- Molecular resolution to a morphological controversy
- Did the historical range of the European bison (Bison bonasus L.) extend further south?—a new finding from the Yenikapı Metro and Marmaray excavation, Turkey
- DNA capture and next-generation sequencing can recover whole mitochondrial genomes from highly degraded samples for human identification
- Pleistocene Chinese cave hyenas and the recent Eurasian history of the spotted hyena, Crocuta crocuta
- Neanderthal behaviour, diet, and disease inferred from ancient DNA in dental calculus
- Current evidence allows multiple models for the peopling of the Americas
- Reconstructing the Deep Population History of Central and South America
- Massive migration from the steppe was a source for Indo-European languages in Europe
- Novel effects of chromosome Y on cardiac regulation, chromatin remodeling, and neonatal programming in male mice
- Aboriginal mitogenomes reveal 50,000 years of regionalism in Australia
- Unraveling the phylogenetic relationships of the extinct bovid Myotragus balearicus Bate 1909 from the Balearic Islands
- Low-cost cross-taxon enrichment of mitochondrial DNA using in-house synthesised RNA probes
- Reply to Santiago-Rodriguez et al.
- An extinct nestorid parrot (Aves, Psittaciformes, Nestoridae) from the Chatham Islands, New Zealand
- Late Pleistocene Australian marsupial DNA clarifies the affinities of extinct megafaunal kangaroos and wallabies
- Further dissection of a genomic locus associated with behavioral activity in the Wistar-Kyoto hyperactive rat, an animal model of hyperkinesis
- Identification and validation of Loci and candidate genes linked to cardiac hypertrophy.
- The Collaborative Cross, a community resource for the genetic analysis of complex traits
- A genetic locus accentuates the effect of volume overload on adverse left ventricular remodeling in male and female rats
- Distinct QTLs are linked to cardiac left ventricular mass in a sex-specific manner in a normotensive inbred rat intercross
- Corticosteroid binding globulin
- QTL mapping for traits associated with stress neuroendocrine reactivity in rats
- Genetic determinants of systolic and pulse pressure in an intercross between normotensive inbred rats
- Hypertensive cardiac remodeling in males and females
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Co-workers & collaborators
- RK
Rafał Kowalczyk
- EH
Emilia Hofman-Kamińska
- DF
Damien Fordham
- AV
Ayla Van Loenen
- CR
Carsten Rahbek
- JP
July Pilowsky