André Gomes-dos-Santos

Publications

• Freshwater conservation assessments in (semi-)arid regions: Testing river intermittence and buffer strategies using freshwater mussels (Bivalvia, Unionida) in Morocco
• The complete mitochondrial genome of the deep-water cartilaginous fish Hydrolagus affinis (de Brito Capello, 1868) (Holocephali: Chimaeridae)
• Constructing the mitochondrial genome of the Peruvian grunt Anisotremus scapularis Tschudi, 1846 (Lutjaniformes: Haemulidae) using RNA-seq data
• Molluscan genomics: the road so far and the way forward
• Oued Bouhlou: A new hope for the Moroccan pearl mussel
• Oued Bouhlou: A new hope for the Moroccan pearl mussel
• Complete mitogenome of the shortfin spiny eel, Notacanthus bonaparte (Elopomorpha; Notacanthiformes)
• The Crown Pearl: a draft genome assembly of the European freshwater pearl mussel Margaritifera margaritifera (Linnaeus, 1758)
• A new gene order in the mitochondrial genome of the deep-sea diaphanous hatchet fish Sternoptyx diaphana Hermann, 1781 (Stomiiformes: Sternoptychidae)
• The complete mitochondrial genome of Thymallus thymallus (Linnaeus, 1758) (Actinopterygii, Salmonidae) obtained by long range PCRs and double multiplexing
• Book of Abstracts - Blue Think Conference
• The male and female complete mitochondrial genomes of the threatened freshwater pearl mussel Margaritifera margaritifera (Linnaeus, 1758) (Bivalvia: Margaritiferidae)
• Complete mitochondrial genomes of the freshwater mussels Amblema plicata (Say, 1817), Pleurobema oviforme (Conrad, 1834), and Popenaias popeii (Lea, 1857) (Bivalvia: Unionidae: Ambleminae)
• Genome announcement The complete mitochondrial genome of Thymallus thymallus ( Linnaeus , 1758 ) ( Actinopterygii , Salmonidae ) obtained by long range PCRs and double multiplexing by
• Shedding light on the Chimaeridae taxonomy: the complete mitochondrial genome of the cartilaginous fish Hydrolagus mirabilis (Collett, 1904) (Holocephali: Chimaeridae)
• Global systematic diversity, range distributions, conservation and taxonomic assessments of graylings (Teleostei: Salmonidae; Thymallus spp.)
• Complete mitochondrial genome of the ragworm annelid Hediste diversicolor (of Müller, 1776) (Annelida: Nereididae)
• Molluscan mitochondrial genomes break the rules
• The complete mitochondrial genome of the endemic Iberian pygmy skate Neoraja iberica Stehmann, Séret, Costa, & Baro 2008 (Elasmobranchii, Rajidae)
• Complete mitogenome of the Oven's halosaur, Halosaurus ovenii (Elopomorpha; Notacanthiformes)
• A genome assembly of the Atlantic chub mackerel (Scomber colias): a valuable teleost fishing resource
• Diversity, biogeography, evolutionary relationships, and conservation of Eastern Mediterranean freshwater mussels (Bivalvia: Unionidae)
• Complete mitochondrial genome of an Arctic Collared Lemming subspecies endemic to the Novaya Zemlya Archipelago, Russia
• Cartilaginous fishes offer unique insights into the evolution of the nuclear receptor gene repertoire in gnathostomes
• Mitogenomic phylogeny and fossil-calibrated mutation rates for all F- and M-type mtDNA genes of the largest freshwater mussel family, the Unionidae (Bivalvia)
• Revisiting the North American freshwater mussel genus Quadrula sensu lato (Bivalvia Unionidae): Phylogeny, taxonomy and species delineation
• A genome assembly of the Atlantic chub mackerel (Scomber colias): a valuable teleost fishing resource
• A mitochondrial genome assembly of the opal chimaera, Chimaera opalescens Luchetti, Iglésias et Sellos 2011, using PacBio HiFi long reads
• Phylogeographic study of the West Australian freshwater mussel, Westralunio carteri, uncovers evolutionarily significant units that raise new conservation concerns
• A de novo transcriptome assembly of the annelid worm Hediste diversicolor
• The gill transcriptome of threatened European freshwater mussels
• A novel assembly pipeline and functional annotations for targeted sequencing: A case study on the globally threatened Margaritiferidae (Bivalvia: Unionida)
• PacBio Hi-Fi genome assembly of the Iberian dolphin freshwater mussel Unio delphinus Spengler, 1793
• The Crown Pearl V2: an improved genome assembly of the European freshwater pearl musselMargaritifera margaritifera(Linnaeus, 1758)
• A PacBio Hi-Fi genome assembly of the painter’s mussel Unio pictorum (Linnaeus, 1758)
• The Crown Pearl V2: an improved genome assembly of the European freshwater pearl mussel Margaritifera margaritifera (Linnaeus, 1758)
• Rare but not absent: the Inverted Mitogenomes of Deep-Sea Hatchetfish
• A PacBio Hi-Fi genome assembly of the Painter's Mussel Unio pictorum (Linnaeus, 1758)
• The conservation status of freshwater species and habitats in Key Biodiversity Areas at the Douro river basin
• Coevolution With Host Fishes Shapes Parasitic Life Histories in a Group of Freshwater Mussels (Unionidae: Quadrulini).
• Book of Abstracts - Blue Think Conference (2021)
• How complex is the hidden species diversity of the teleost Plotosus genus?
• The silent extinction of freshwater mussels in Portugal
• Examination of gammarid transcriptomes reveals a widespread occurrence of key metabolic genes from epibiont bdelloid rotifers in freshwater species
• Dataset of the complete mitogenome of the deep-sea sailfin roughshark, Oxynotus paradoxus Frade, 1929
• Mitochondrial replication's role in vertebrate mtDNA strand asymmetry
• The Crown Pearl V2: the improved genome assembly of the European freshwater pearl mussel Margaritifera margaritifera (Linnaeus, 1758).
• Genomic Adaptations Associated with Climate Change and Biological Changes in the unionid mussel Unio delphinus (Spengler, 1793)
• EdgeOmics - Freshwater Bivalves at the edge: Adaptation genomics under climate-change scenarios
• Genomics in a Changing World: Conservation, Invasive Species, and Climate Change
• The PacBio Hi-Fi genome assembly of the Iberian dolphin freshwater mussel Unio delphinus
• The PacBio Hi-Fi genome assembly of the delicate freshwater mussel Unio mancus Lamarck, 1819
• Molluscan Genomics: The road so far and the way forward
• A multi-tissue de novo transcriptome assembly and relative gene expression of the vulnerable freshwater salmonid Thymallus ligericus
• The transcriptome assembly of the European freshwater mussel Unio elongatulus C. Pfeiffer, 1825