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bf_Avana19q2_ht29_a549_ovcar8.txt (505.24 kB)
JUPYTER
cas12a-step01-screen_QC.ipynb (139.66 kB)
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cas12a-step02_polish_fc_matrix.ipynb (51.13 kB)
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cas12a-step03_fc_position_effects.ipynb (148.98 kB)
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cas12a-step04_calc_SMF.ipynb (405.53 kB)
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cas12a-step05_compare-SMF-to-BF.ipynb (68.05 kB)
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cas12a-step06_calc_dLFC.ipynb (143.95 kB)
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cas12a-step07_robustZ_of_dLFC.ipynb (79.33 kB)
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pan-species-control-essentials-50genes.txt (0.9 kB)
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pan-species-control-nonessentials-50genes.txt (0.95 kB)
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paralog-pairs-to-test.txt (5.16 kB)
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STable1_predicted_paralog_pairs.txt (3.86 kB)
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Supplementary_Table2.txt (12.73 kB)
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Supplementary_Table3.txt (1.42 MB)
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enCas12a screen analysis pipeline
Jupyter notebooks (Python v3.8) pipeline for analysis of enCas12a dual-guide paralog knockout screens.
