Reproduce-resbaz.pdf (5.06 MB)
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Towards reproducible computational biology

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posted on 30.06.2018, 05:46 authored by Sebastian SchmeierSebastian Schmeier
Slides from my seminar and hands-on session at the Research Bazaar (ResBaz) conference June 2018 about how to achieve reproducibility in computational biology / bioinformatics analyses. I discussed life sciences package managers, isolated software environments with conda, workflow management with Snakemake, and containerization with Singularity and how to integrate everything into a consistent analysis workflow. The tutorial is available at: