pbio.3002546.s008.pptx (128.14 kB)
Conserved interaction sites of ZepA from species of distinct bacterial phyla.
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posted on 2024-03-11, 17:42 authored by Cristina Sarasa-Buisan, Jesús A. G. Ochoa de Alda, Cristina Velázquez-Suárez, Miguel Ángel Rubio, Guadalupe Gómez-Baena, María F. Fillat, Ignacio LuqueStructural models obtained with AlphaFold2 for the ZepA protein of the indicated species were used to interrogate the MIB server or the GalaxySite server to determine putative interaction sites. Conserved sites are shown as solid boxed and absent sites as empty boxes. Zn, zinc; LP4, a lipopolisacharide (2-deoxy-3-O-[(3R)-3-hydroxytetradecanoyl]-2-{[(3R)-3-hydroxytetradecanoyl]amino}-4-O-phosphono-beta-D-glucopyranose); C3S, a planar sterol (cholest-5-en-3-yl hydrogen sulfate); NAG, N-acetyl glucosamine (2-acetamido-2-deoxy-beta-D-glucopyranose); MAN (alpha-D-mannopyranose); OLA (oleic acid).
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phylogenetic analysis suggestsexperimental evidence showeddistant bacterial lineagescomparative proteomics conductedpotential zinc limitationdiv >< pzur proteinzur mayzur zinc acquisitionzepa representszepa homologszepa wild typetuned responsesresults showputative functionprimordial systemmutant comparedkey playergenomic contextfur familyfirst regulatorsdeveloped fineanabaena abundant proteins
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