pone.0286440.s003.pdf (1.65 MB)
Visualization of protein-protein interaction network by String of proteins negatively controled by AlgU.
journal contribution
posted on 2023-11-15, 18:38 authored by Sangita Chowdhury-Paul, Iliana C. Martínez-Ortíz, Victoria Pando-Robles, Soledad Moreno, Guadalupe Espín, Enrique Merino, Cinthia Núñez184 up-regulated proteins in the absence of the sigma factor AlgU, during encysting conditions were analyzed. Interaction nodes such as those constituted by proteins involved in amino acids (green circle), aminoacyl-tRNA (cyan circle), or fatty acid (black circle) biosynthesis are indicated. Disconnected nodes are hided; the network was generated using an interaction score of 0.7.
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upon encystment inductionproduce alkyl resorcinolsnegative bacteria sinceconsensus sequence recognizedwithstand adverse conditionsdiv >< pvegetative growing conditionswithstand oxidative stressprevious work demonstratedkey regulatory roledirect algu targetspseudomonas aeruginosa azotobacter vinelandii oxidative stressencysting conditionsvinelandii p aeruginosa vegetative growthpseduomonadacea trehalose synthesisspecific scoringsigma factorresistant cystsproteomic approachproteins involvedpositive controlgenerated basedforms desiccationessential roledifferentiated cellclosed relativecell membranearomatic lipidsalso foundalgu regulonalginate production
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