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Tutorial: RNA-seq differential expression & pathway analysis with Sailfish, DESeq2, GAGE, and Pathview

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journal contribution
posted on 2015-12-05, 18:25 authored by Stephen TurnerStephen Turner

Tutorial for doing RNA-seq differential gene expression analysis with DESeq2 from gene-level quantification using Sailfish, with a downstream pathway analysis using GAGE. Data used here is pre-processed data available on figshare.