TF motif enrichment in actively infected cells.

Jefferys, Stuart R.; Burgos, Samuel D.; Peterson, Jackson J.; Selitsky, Sara R.; Turner, Anne-Marie W.; James, Lindsey I.; Tsai, Yi-Hsuan; Coffey, Alisha R.; Margolis, David M.; Parker, Joel; Browne, Edward P.

doi:10.1371/journal.ppat.1009346.s009

ppat.1009346.s009.doc (24.45 kB)

TF motif enrichment in actively infected cells.

journal contribution

posted on 2021-02-26, 18:42 authored by Stuart R. Jefferys, Samuel D. Burgos, Jackson J. Peterson, Sara R. Selitsky, Anne-Marie W. Turner, Lindsey I. James, Yi-Hsuan Tsai, Alisha R. Coffey, David M. Margolis, Joel Parker, Edward P. Browne

HOMER TF motif enrichment analysis of differentially open peaks between actively infected cells (GFP+) and latently infected (GFP-) cells. Top 100 enriched motifs in peaks preferentially open in actively infected cells are shown. Target Sequences represent genomic sequences that have significantly elevated accessibility in actively infected cells. Background sequences represent all open chromatin regions in CD4 T cells.

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