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Single-Molecule Discrimination of Labeled DNAs and Polypeptides Using Photoluminescent-Free TiO2 Nanopores
journal contribution
posted on 2018-10-29, 00:00 authored by Rui Wang, Tal Gilboa, Jiaxi Song, Diana Huttner, Mark W. Grinstaff, Amit MellerMulticolor
fluorescence substantially expands the sensing capabilities
of nanopores by complementing or substituting the resistive pulsing
signals. However, to date single-fluorophore detection in multiple
color channels has proven to be challenging primarily due to high
photoluminescence (PL) emanating from the silicon nitride (SiNx) membrane. We hypothesize that the high
bandgap of titanium oxide (TiO2) would eliminate the PL
background when used as a substrate for a nanopore, and hence enable
individual fluorophore sensing during the fast passage of biomolecules
through the pore. Herein, we introduce a method for fabricating locally
supported, free-standing, TiO2 membranes, in which solid-state
nanopores can be readily drilled. These devices produce essentially
no PL in the blue-to-red visible spectral range, even when excited
by multiple lasers simultaneously. At the same time, the TiO2 nanopores exhibit low electrical noise comparable with standard
SiNx devices. Importantly, the optical
signal-to-background ratio (SBR) in single-molecule sensing is improved
by an order of magnitude, enabling the differentiation among labeled
DNA molecules of similar length based solely on their labeling scheme.
Finally, the increased SBR of the TiO2 devices allows detection
of single fluorophores conjugated to the lysine or cysteine residues
of short polypeptides, thus introducing the possibility for optical
based peptide/protein discrimination in nanopores.
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date single-fluorophore detectionTiO 2 membranesSiN xSiN x devicescolor channelsPhotoluminescent-Free TiO 2 Nanopores Multicolor fluorescenceTiO 2 devicesTiO 2 nanopores exhibitTiO 2Single-Molecule Discriminationsignal-to-background ratioSBRPL backgroundLabeled DNAscysteine residuestitanium oxidesilicon nitrideDNA molecules
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