Run times of six RVAS methods (hours: minutes: seconds) using 12 cores for 898 cases and 912 controls randomly selected from the 1000GP cohort.

Susak, Hana; Serra-Saurina, Laura; Demidov, German; Rabionet, Raquel; Domènech, Laura; Bosio, Mattia; Muyas, Francesc; Estivill, Xavier; Escaramís, Geòrgia; Ossowski, Stephan

doi:10.1371/journal.pcbi.1007784.s016

pcbi.1007784.s016.docx (39.25 kB)

Run times of six RVAS methods (hours: minutes: seconds) using 12 cores for 898 cases and 912 controls randomly selected from the 1000GP cohort.

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posted on 2021-02-19, 19:14 authored by Hana Susak, Laura Serra-Saurina, German Demidov, Raquel Rabionet, Laura Domènech, Mattia Bosio, Francesc Muyas, Xavier Estivill, Geòrgia Escaramís, Stephan Ossowski

A total of 16676 genes were tested using an allele frequency threshold of AF< = 0.01 for all identified SNVs and indels.

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EHMT semi-synthetic whole-exome sequenci...candidate predisposition genes variant association studies BATI phenotypic variance variant Association Test RVAS tests Integrated Nested Laplace Approximation rvGWAS 7A Chronic Lymphocytic Leukemia study COPS

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Run times of six RVAS methods (hours: minutes: seconds) using 12 cores for 898 cases and 912 controls randomly selected from the 1000GP cohort.

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