pone.0257862.s001.pdf (94.4 kB)
Relative abundances of KEGG pathways in non-cyanobacterial prokaryotic sequences.
journal contribution
posted on 2021-10-12, 17:28 authored by Kaoru Matsumoto, Tomoko Sakami, Tsuyoshi Watanabe, Yukiko Taniuchi, Akira Kuwata, Shigeho Kakehi, Tan Engkong, Yoji Igarashi, Shigeharu Kinoshita, Shuichi Asakawa, Masahira Hattori, Shugo Watabe, Yoshizumi Ishino, Takanori Kobayashi, Takashi Gojobori, Kazuho IkeoThe labels indicate “broad category → KEGG category → KEGG pathway”. Only KEGG pathways with max abundance > 0.02 are shown. As some genes are assigned to more than one pathway, the total is greater than 1.0.
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marine prokaryotic communitiescarbon metabolism pathways22 metagenomes collected11 time pointspredicted functional profilesfunctional metagenomic insightsobtain seasonal snapshotsfollow seasonal cyclescyanobacterial prokaryotic communitytrophic condition associateddiv >< pseasonal changecommunity functionfunctional geneswater temperaturetwo sitestaxonomic compositionstaxonomic compositionstill limitedsignal transductionseveral groupssendai bayseasonal changesresults indicatefuture researchencode enzymescellular communicationattached lifestyle
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