ppat.1011941.s010.pdf (139.32 kB)
Reference sequences of the viral genome IL and IS76 and their pairwise alignment.
journal contribution
posted on 2024-01-12, 18:39 authored by Margaux Jammes, Victor Golyaev, Alejandro Fuentes, Nathalie Laboureau, Cica Urbino, Clemence Plissonneau, Michel Peterschmitt, Mikhail M. PoogginThe start and stop codons of viral ORFs are coloured in red and underlined, the CAAT and TATA-boxes of the promoters coloured in brick red, the TATA-associated composite element (TACE) and conserved late elements (CLE) highlighted in green and cyan, respectively, the iterons highlighted in grey and SNPs and indels highlighted in yellow.
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modulates dcl activities24 nt sirnasreplication region acquiredreplication also servelate infection stagesfrequently generating recombinantsbreaks disease resistanceis76 efficiently competesinfected susceptible plantsdiv >< pdependent rna polymerasecoat protein genesincreased sirna productionhost replicationmixed infectiongenerating dclsdependent mechanismscoat proteinsclade rnaboosted productionbegomovirus resistanceviral genesstranded intermediatessmall rnaomesmall interferingsirna amplificationsimilar levelssilencing suppressorshort sequencerelated begomovirusrecombinant virusrecombinant derivativepromotes expressionparental virusnegative impactmixed infectionsgeminiviridae entire genomeselimination associateddna accumulationcultivated tomatoesconstitutively overexpressedclade rdr1circular doublebidirectional promoterbegomovirus >, family1
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