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pgen.1009689.s013.pdf (38.61 MB)

PDF summary catalog files for the "DYAD" motifs found with RSAT under MOA-seq footprints (MFs, frenter peaks).

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posted on 2021-08-12, 19:09 authored by Savannah D. Savadel, Thomas Hartwig, Zachary M. Turpin, Daniel L. Vera, Pei-Yau Lung, Xin Sui, Max Blank, Wolf B. Frommer, Jonathan H. Dennis, Jinfeng Zhang, Hank W. Bass

This PDF file provides a reference document, one page per motif, listing the assigned RSAT-dyad motif name (e.g. dym01), total number of sites in B73v3, percentage found in annotated repeats, the consensus and sequence LOGOs from RSAT reports, the median TSS-relative position and motif frequency histograms around the TSSs of the filtered gene set (FGS), the local base count composition flanking the motif midpoints, and average local MOA-seq coverage centered on the motifs for all (All) motifs, or those motifs split into either not overlapping/in repeats (NR) or overlapping/in repeats (IR).

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