pone.0256126.s011.pdf (14.56 kB)
Number of insertion/deletion events by genomic region in each Pleurothallidinae plastome.
journal contribution
posted on 2021-08-27, 17:27 authored by Anna Victoria Silvério R. Mauad, Leila do Nascimento Vieira, Valter Antônio de Baura, Eduardo Balsanelli, Emanuel Maltempi de Souza, Mark W. Chase, Eric de Camargo SmidtThe plastome of Madevallia picturata was the reference for all indels.
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whole plastome sequencestypical quadripartite structurepartial introns ).overall plastome lengthmtdna tree retrievedindicating possible occurrenceincomplete lineage sortingphylogenetic relationships foundmitochondrial dna treesstrongly supported incongruencesequenced complete plastomesphylogenomic analyses showedobserved among plastidnew variable markersfuture phylogenetic studiesdiv >< pcompared phylogenetic resultsmitochondrial markersvariable regionsrecent studiesfuture roleclades foundsmall singlepositive selectionplastid phylogenomicsparallel analysesndh molecular characteristicsinverted repeatsintrogressive hybridizationindependent lossgene contenteight speciesdesigned primerscopy regioncomparative analysescodon usage13 protein
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