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Novel models for the prediction of drug–gene interactions

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journal contribution
posted on 2021-11-15, 14:20 authored by Denise Türk, Laura Maria Fuhr, Fatima Zahra Marok, Simeon Rüdesheim, Anna Kühn, Dominik Selzer, Matthias Schwab, Thorsten Lehr

Adverse drug reactions (ADRs) are among the leading causes of death, and frequently associated with drug–gene interactions (DGIs). In addition to pharmacogenomic programs for implementation of genetic preemptive testing into clinical practice, mathematical modeling can help to understand, quantify and predict the effects of DGIs in vivo. Moreover, modeling can contribute to optimize prospective clinical drug trial activities and to reduce DGI-related ADRs.

Approaches and challenges of mechanistical DGI implementation and model parameterization are discussed for population pharmacokinetic and physiologically based pharmacokinetic models. The broad spectrum of published DGI models and their applications is presented, focusing on the investigation of DGI effects on pharmacology and model-based dose adaptations.

Mathematical modeling provides an opportunity to investigate complex DGI scenarios and can facilitate the development process of safe and efficient personalized dosing regimens. However, reliable DGI model input data from in vivo and in vitro measurements are crucial. For this, collaboration among pharmacometricians, laboratory scientists and clinicians is important to provide homogeneous datasets and unambiguous model parameters. For a broad adaptation of validated DGI models in clinical practice, interdisciplinary cooperation should be promoted and qualification toolchains must be established.

Funding

This paper was funded by the Robert Bosch Stiftung (Stuttgart, Germany) (Matthias Schwab), the European Commission Horizon 2020 UPGx grant 668353 (Matthias Schwab), a grant from the German Federal Ministry of Education and Research (BMBF 031L0188D) (Matthias Schwab), the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany’s Excellence Strategy—EXC 2180—390900677 (Matthias Schwab), the German Federal Ministry of Education and Research (BMBF, Horizon 2020 INSPIRATION grant 643271), under the frame of ERACoSysMed (Thorsten Lehr) and the BMBF (OSMOSES grant 031L0161C) (Thorsten Lehr).

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