Model parameters inferred by the RBM-LR model.

Bravi, Barbara; Balachandran, Vinod P.; Greenbaum, Benjamin D.; Walczak, Aleksandra M.; Mora, Thierry; Monasson, Rémi; Cocco, Simona

doi:10.1371/journal.pcbi.1009297.s002

pcbi.1009297.s002.pdf (418.56 kB)

Model parameters inferred by the RBM-LR model.

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posted on 2021-09-02, 17:51 authored by Barbara Bravi, Vinod P. Balachandran, Benjamin D. Greenbaum, Aleksandra M. Walczak, Thierry Mora, Rémi Monasson, Simona Cocco

Same representation as in Fig 2A where, by starting with CDR3s in the Left+Right encoding, 2 sets of RBM weights, w^L and w^R, are inferred. We selected for illustration and as they capture the sequence motifs of responding clones highlighted in Fig 5A (dark red boxes).

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Model parameters inferred by the RBM-LR model.

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