pone.0298636.s003.docx (1.42 MB)
Linkage Disequilibrium Decay (LDD) plots, demonstrating a reduction in the squared correlation coefficient (r2) between SNP pairs as a function of their physical distance within each chromosome.
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posted on 2024-02-23, 19:04 authored by Kuldeep Kandarkar, Viswanathan Palaniappan, Subhrajit Satpathy, Anilkumar Vemula, Ravikesavan Rajasekaran, Prabhakaran Jeyakumar, Nakkeeran Sevugaperumal, Shashi Kumar GuptaLinkage Disequilibrium Decay (LDD) plots, demonstrating a reduction in the squared correlation coefficient (r2) between SNP pairs as a function of their physical distance within each chromosome.
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xlink "> informationpresent study determinedpearl millet genomecut major groupspopulation grouping patternsbased population stratificationbased genetic distancestwo major clusterspresent study revealeddistributed uniformly acrossunderstanding genetic diversitygenetic diversity basedgenetic diversity amongprincipal coordinate analysisjoining phylogenetic analysisvariation among subpopulationshybrid parental linesgenetic diversitypopulation structuregenetic basevaried acrosstwo clearrevealed 7parental linescombined analysiswithin subvaluable sourceusing 16strategize enhancingsignificant amountseed parentsprone environmentsobserved heterozygositynew allelesmolecular variancemarkers generatedlines ).ld regionsinbred lineshighest numberhelp breedersdifferent chromosomesbreeding programsbetter adaptationbayesian model69 mb36 %)334 ),11 agro031 ).
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