figshare
Browse
ppat.1009374.s003.pdf (182.27 kB)

Divergence tree and zoom into additional sequence clusters, which did not result in large community spread.

Download (182.27 kB)
journal contribution
posted on 2021-03-19, 17:39 authored by Madlen Stange, Alfredo Mari, Tim Roloff, Helena MB Seth-Smith, Michael Schweitzer, Myrta Brunner, Karoline Leuzinger, Kirstine K. Søgaard, Alexander Gensch, Sarah Tschudin-Sutter, Simon Fuchs, Julia Bielicki, Hans Pargger, Martin Siegemund, Christian H. Nickel, Roland Bingisser, Michael Osthoff, Stefano Bassetti, Rita Schneider-Sliwa, Manuel Battegay, Hans H. Hirsch, Adrian Egli

A. Isolates from Basel area cohort in global context. B. A small clade assigned to B.1.5 consists of two clusters with an accumulation of samples from Basel. C. Cluster within lineage B.1.8 with two Basel samples without known epidemiological link. D. Two family cluster within lineage B.2 that did not spread further into the Basel community.

(PDF)

History

Usage metrics

    PLOS Pathogens

    Categories

    Keywords

    COVID -19 outbreakSARS-CoV -2 naso-oropharyngeal swabs.1-CSNPPANGOLIN taxonomic lineagesmass gathering eventClinicalTrials.gov NCT 04351503COVID -19 PipelineintroductionSARS-CoV -2 outbreakFebruary 2615324TMarch 23 rdSARS-CoV -2 genomesphylogeneticB .1 lineage variantUniversity Hospital Baseldatafamily transmissionsCOVGAP

    Licence

    CC BY 4.0

    Exports

    RefWorks
    BibTeX
    Ref. manager
    Endnote
    DataCite
    NLM
    DC