pcbi.1009664.s001.docx (48.12 kB)
Dimensions of the elements constructing the coarse-grained models.
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posted on 2021-12-13, 18:40 authored by Assaf AmitaiDescription of the elements constructing the coarse-grained antibody model (S1C and S1D Fig) and the immunogens (Figs 1A-i, 1B-i, 3A-i, 3B-i, S1A and S1B).
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grained md simulationsescaping mutations utilizingmutability gradient alongidentify key residuesevade antibody responselikely functional roleantibody escape mutationsinfluenza h1n1 spikecoronavirus spike evolutionviral surface geometrysurface residuesviral surface2009 h1n1residues antibodyviral spikeviral structuretargeting gradientobserved mutationsacquire antibody2 spikexlink ">used coarsetargeted equallysilico modelsmainly targetsmain axishigh densitycirculating virusesbased approachantigenic sitesallowed us2 pandemics
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