Additional file 4 of geneBasis: an iterative approach for unsupervised selection of targeted gene panels from scRNA-seq

Missarova, Alsu; Jain, Jaison; Butler, Andrew; Ghazanfar, Shila; Stuart, Tim; Brusko, Maigan; Wasserfall, Clive; Nick, Harry; Brusko, Todd; Atkinson, Mark; Satija, Rahul; Marioni, John C.

doi:10.6084/m9.figshare.17133265.v1

13059_2021_2548_MOESM4_ESM.pdf (168.13 kB)

Additional file 4 of geneBasis: an iterative approach for unsupervised selection of targeted gene panels from scRNA-seq

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posted on 2021-12-07, 04:59 authored by Alsu Missarova, Jaison Jain, Andrew Butler, Shila Ghazanfar, Tim Stuart, Maigan Brusko, Clive Wasserfall, Harry Nick, Todd Brusko, Mark Atkinson, Rahul Satija, John C. Marioni

Additional file 4: Supplementary Note 1. Analysis of robustness of geneBasis approach.

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national institutes of health royal society (gb) leona m. and harry b. helmsley charitable trust cancer research uk European Molecular Biology Laboratory (EMBL) (4843)

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targeted gene panels resolve cell types optimal gene panel identify gene panels manifold constructed using seq abstract scrna true manifold seq datasets unsupervised selection spatial transcriptomics rare cells maximum distance iterative approach increasingly used identifying markers existing methods best subset

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Additional file 4 of geneBasis: an iterative approach for unsupervised selection of targeted gene panels from scRNA-seq

Funding

national institutes of health royal society (gb) leona m. and harry b. helmsley charitable trust cancer research uk European Molecular Biology Laboratory (EMBL) (4843)

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