figshare
Browse
pgen.1009970.s006.pdf (55.57 kB)

16S phylogenies of the most abundant bacteria.

Download (55.57 kB)
journal contribution
posted on 2021-12-23, 18:50 authored by Victoria A. Ingham, Jacob A. Tennessen, Eric R. Lucas, Sara Elg, Henrietta Carrington Yates, Jessica Carson, Wamdaogo Moussa Guelbeogo, N’Fale Sagnon, Grant L. Hughes, Eva Heinz, Daniel E. Neafsey, Hilary Ranson

Phylogenies constructed using 16S from the consensus genome for (a) Elizabethkingia; (b) Asaia and (c) Serratia. Each sequence with a green dot is confirmed to have been isolated from an Anopheline mosquito. Sequence extracted from the bacteria in this study are highlighted in red. Sequence names are taken directly from NCBI. Phylogenies created with MegaX using CLUSTAL alignment followed by a Neighbour Joining Tree with 1000 bootstraps. Figures on branches represent bootstrap values.

(PDF)

History

Usage metrics

    PLOS Genetics

    Categories

    Keywords

    oxidative phosphorylation pathwayincreased respiratory ratediv >< pcompare three populationsresistant populations comparedwhole genome sequencingincreasingly complicated picturetwo resistant coloniesmajor malaria vectorimplement targeted studieshighly complicated phenotypemicrobiome changes combineanopheles coluzzii original resistantselected coloniesmicrobiome profilemalaria controlmajor threatgenome linkedcomplex picturecoluzzii translated phenotypicallytranscriptomics revealstaken togethermultiple transcriptomicmonth periodlinked directlygenetic backgroundgenes withinelevated metabolismchanges acrosscausal mechanismsalso available2rb inversion

    Licence

    CC BY 4.0

    Exports

    RefWorks
    BibTeX
    Ref. manager
    Endnote
    DataCite
    NLM
    DC