Leptospira composition profiles for directly sequenced soil and water samples.
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posted on 2022-10-26, 18:18 authored by Myranda Gorman, Ruijie Xu, Dhani Prakoso, Liliana C. M. Salvador, Sreekumari Rajeev2A. Proportion of Leptospira clades identified; 2B. Leptospira species-level classification. P1 clade species identified in the soil sample is labeled in the figure. The clade of each Leptospira species is annotated in the parenthesis behind species names in the figure legend (P1: Pathogenic; P2: Intermediate; S1: Saprophytic clade 1; U: Unclassified).
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xlink "> leptospirosiswidespread global zoonosismajor transmission sourcesenrichment cultures followedenrichment culture followedbased metagenomic sequencingleptospira spp testing environmental samplesdirect metagenomic sequencingmetagenomic sequencingleptospira direct sequencingenvironmental samplesthreatening diseaseresults showdisease outbreaksdirect pcrdetection efficacy16s amplification
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