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DNA methylation of EPCAM in whole biopsy samples compared to separated epithelium and negative cell fraction.

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posted on 2013-02-08, 00:36 authored by Andreas C. Jenke, Jan Postberg, Timothy Raine, Komal M. Nayak, Malte Molitor, Stefan Wirth, Arthur Kaser, Miles Parkes, Robert B. Heuschkel, Valerie Orth, Matthias Zilbauer

A) DNA methylation of 5 CpGs within the EPCAM gene using a pyrosequencing assay. B) Total CpG methylation comparing EPCAM versus NOD1. Assays included 5 CpG sites for EPCAM and 2 for NOD1. C) EPCAM mRNA expression in whole biopsies compared to epithelial positive and negative separated cell fraction. Data is expressed as mean +/− SEM of 5 tissue samples. Differences were considered as statistically significant if p<0.05 (** p<0.001, ***p<0.0001).

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