pone.0297172.g001.tif (203.68 kB)
Tracking COVID-19 lineages in a single building.
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posted on 2024-02-09, 18:25 authored by John Van Dusen, Haley LeBlanc, Nicholas Nastasi, Jenny Panescu, Austin Shamblin, Jacob W. Smith, Michael G. Sovic, Amanda Williams, Mikkel B. M. Quam, Seth Faith, Karen C. DannemillerSamples were collected over a 5-month period with a 1-month gap due to a notable reduced campus residential population during the holidays. Each line represents one sample, and the color of the line indicates the estimated frequency of the lineage present in that sample based on measured mutations. There is a gap from November 2021 to January 2022 due to holiday break and a reduced campus residential population.
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utilized wastewater samplinginfer community trendsgenome sequencing protocolensure public healthosu &# 8217monitor circulating variantsaverage estimated frequencyprimary variant presentestimated frequencyprimary variantvariants presentvariant compositionviral abundancetrack covidthree variantssurrounding populationscale resolutionresults supportrelative abundancesrecent effortslevel inferencesjanuary 2022earliest sampledominant straincolumbus campuscampus correlatesbased whole19 variants100 %.02 ).(&# 177
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