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Sequence alignment of all tiger, lion, and domestic cat sequences available in GISAID as of December 2020.

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posted on 2021-02-26, 18:43 authored by Katarina M. Braun, Gage K. Moreno, Peter J. Halfmann, Emma B. Hodcroft, David A. Baker, Emma C. Boehm, Andrea M. Weiler, Amelia K. Haj, Masato Hatta, Shiho Chiba, Tadashi Maemura, Yoshihiro Kawaoka, Katia Koelle, David H. O’Connor, Thomas C. Friedrich

Sequences were aligned against MW219695.1, the inoculum virus used in these experiments. Consensus-level differences are highlighted with a blue vertical marker. Indels are noted with a horizontal vertical marker. The spike open reading frame is annotated with a green marker and site amino acid 655 in Spike is highlighted with the orange box. None of these sequences contain a consensus mutation at residue 655 in Spike.

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