Screening experiment example.

A representative hit analysis for one of the 27 screen experiments analyzed with MaGeCK (exp 1_1). A) Hits with FDR < 0.05, and LFC > 0 for infected experiments or LFC < 0 for uninfected are labelled. Best hits are those who have the greatest LFC in infected control and the lowest LFC in control experiment (uninfected). B) Volcano-like plot representing each gene KO according to their FDR (y axis) and LFC (x axis).

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