pone.0296472.g005.tif (198.47 kB)
Scatter plot depicting the relationship between genetic distances of E gene sequences and corresponding geographical distances.
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posted on 2024-02-07, 18:34 authored by Marina Sidorenko, Jana Radzijevskaja, Saulius Mickevičius, Maksim Bratchikov, Dalytė Mardosaitė-Busaitienė, Povilas Sakalauskas, Algimantas PaulauskasEvery dot on the plot corresponds to the pair of viruses. The y-axis shows the divergence between nucleotide sequences in the E gene fragment (462 nt) between two viruses. The distance (in km) between host collection sites for this pair is indicated on the x-axis.
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neudoerfl reference strainhighest notification ratediv >< pdetected tbev genotypespartial e proteinendemic foci confirmed4 %, respectivelyixodes ricinus dermacentor reticulatus borne encephalitis viruscirculating tbev strainslithuania partial eborne encephalitisricinus reticulatus tbe virusviruses basedticks collectedten countiessequence analysisphylogenetic characterisationphylogenetic analysisns3 genesncbi databasemolecular characterisationmaximum identitylocation showedlithuania ’genotypic characterisationgenetic differencesgenbank accessioneuropean subtypedifferent locationscomprehensive databaltic states
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