pone.0296472.g004.tif (789.13 kB)
Phylogenetic tree of TBEV created based on the 151-amino-acid of E protein using ML method and Jones-Taylor-Thornton model.
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posted on 2024-02-07, 18:34 authored by Marina Sidorenko, Jana Radzijevskaja, Saulius Mickevičius, Maksim Bratchikov, Dalytė Mardosaitė-Busaitienė, Povilas Sakalauskas, Algimantas PaulauskasThe scale indicates the number of amino acid substitutions per site. Amino acid substitutions are indicated by a “]” on the right side of the tree.
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neudoerfl reference strainhighest notification ratediv >< pdetected tbev genotypespartial e proteinendemic foci confirmed4 %, respectivelyixodes ricinus dermacentor reticulatus borne encephalitis viruscirculating tbev strainslithuania partial eborne encephalitisricinus reticulatus tbe virusviruses basedticks collectedten countiessequence analysisphylogenetic characterisationphylogenetic analysisns3 genesncbi databasemolecular characterisationmaximum identitylocation showedlithuania ’genotypic characterisationgenetic differencesgenbank accessioneuropean subtypedifferent locationscomprehensive databaltic states
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