pcbi.1008904.g006.tif (1.56 MB)
Misaligned read sources in the synthetic dataset.
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posted on 2021-08-02, 17:39 authored by Wesley M. Marin, Ravi Dandekar, Danillo G. Augusto, Tasneem Yusufali, Bianca Heyn, Jan Hofmann, Vinzenz Lange, Jürgen Sauter, Paul J. Norman, Jill A. HollenbachAnalysis of mismatched or unresolved genotype determination results for the synthetic sequence dataset where all misaligned reads are traced back to their source gene. The connections between genes represent the number of misaligned reads, and the color of the connection represents the source gene.
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short-read sequencing datacustom alignment processing workflowcopy number determination performancekiller-cell immunoglobulin-like rec...KIR gene copy number classification...high-throughput KIR genotypinggenotype determination workflowKIR genesgenotype determination performanceKiller-cell Immunoglobulin-like Rec...chromosome 19 encodes receptorsAfrican validation cohortshigh-throughput KIR sequence analysisnovel alignment strategiesgenotype determination accuracygene copy numberhigh-fidelity sequencing method
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