Figure S3 Krona Taxonomy

Abundant species according to their taxonomy within each group. These species represent alignments of reads that are above the average quality of alignment to H. hepaticus and have counts of reads greater than that of M. pulmonis. Alignment score gradient is at the bottom left. Groups are: (A) mice that were SMAD3 wild-type and H. Hepaticus negative (S+H-), (B) mice that were Smad3-/- and H. Hepaticus negative (S-H+), (C) mice that were SMAD3 wild-type and H. Hepaticus positive (S+H-), and (D) mice that were Smad3-/- and H. Hepaticus positive (S-H+).