Figure 2 | Phylogenetic Tree based on Toll-like Receptor 5 (TLR5) CDS

Figure 2 | Phylogenetic Tree based on Toll-like Receptor 5 (TLR5) CDS

Phylogenetic tree analysis based on CDS of TLR5, soluble TLR5 (sTLR5), and potentially soluble TLR5 ((s)TLR5) found in the following species: Salmo salar, Salmo trutta, Oncorhynchus tshawytscha, Oncorhynchus kisutch, Hucho hucho, Homo sapiens , Esox lucius, Oncorhynchus mykiss, Delphinapterus leucas. Aligned protein translation CDS sequences (See Complete Aligned multi-FASTA of Toll-like Receptor 5 (TLR5) CDS) were created using MUSCLE in Aliview. The genes boxed in yellow are (s)TLR5 that were identified from a BLASTN analysis (See BLASTN Analysis Results Files). The genes boxed in purple are known sTLR5 genes (Stephen et al.). The tree was made on Simple Phylogenetic Tree using a default tree format, the distance correction off, excluding gaps off, the clustering method as neighbor-joining, and P.I.M. off.