pgen.1011115.s004.tif (1.35 MB)
Effect of background model on discovered motifs.
figure
posted on 2024-01-16, 18:29 authored by Rylee K. Hackley, Angie Vreugdenhil-Hayslette, Cynthia L. Darnell, Amy K. SchmidSequences corresponding to peaks were extracted and submitted to XTREME as described in the methods. Yellow highlights indicate the motif reported in Fig 4.
(TIF)
History
Usage metrics
Categories
Keywords
uncommon among haloarchaeaprevent futile cyclinggenes primarily involvedfindings suggest rewiringdistinct metabolic capabilitiesfamily transcriptional regulatordiv >< phalobacterium salinarum haloarcula hispanica carbon metabolic pathwayshypersaline adapted archaeon>, trmb bindssalinarum hispanica global regulatorcarbon sourcesadapted archaeapyka ppsa peripheral pathwaysbiosynthetic pathwaysutilize carbohydratestryptophan biosynthesistimely regulationsaccharolytic hyperthermophilessaccharolytic generalistrelated speciesinvestigate whetherintracellular metabolitesglycolytic enzymesdirectly represscofactor biosynthesiscellular processes>, activation15 sites
Licence
Exports
RefWorks
BibTeX
Ref. manager
Endnote
DataCite
NLM
DC