Comparison of codon coverage estimates for drug resistance-conferring SNPs between individual and pooled sequenced samples.

SNP loci are shown on the x axis and codon coverage of read depth on the y axis. Orange: pooled sequenced samples; green: individual sequenced samples. Boxen plot distribution values: black centerline = median, which separates the upper 50^th percentile from the lower 50^th percentile of the dataset; each successive level outward from the median splits the remaining data further into two separate regions, denoting the 25^th, 12.5^th, and 6.25^th percentiles.