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WGS sequencing and assembly

dataset

posted on 2024-06-11, 05:09 authored by Broad Institute

The Broad Institute sequenced the Lodderomyces elongisporus strain NRRL YB-4239 genome at 8.7X coverage using whole genome shotgun (WGS) sequencing. Release 1 of the assembly consists of 144 nuclear genome contigs in 27 supercontigs, and one mitochondrial contig/supercontig. The Broad Institute performed automated annotation on this assembly. The Lodderomyces elongisporus genome assembly will be used for genomic comparisons with Candida albicans.

History

Data contact name

BioProject Curation Staff

Data contact email

bioprojecthelp@ncbi.nlm.nih.gov

Publisher

National Center for Biotechnology Information

Temporal Extent Start Date

2006-08-09

Theme

Non-geospatial

ISO Topic Category

biota

Ag Data Commons Group

ARS Culture Collection

National Agricultural Library Thesaurus terms

genomics; sequence analysis; genome assembly

Pending citation

Public Access Level

Public

Accession Number

PRJNA12899

Preferred dataset citation

It is recommended to cite the accession numbers that are assigned to data submissions, e.g. the GenBank, WGS or SRA accession numbers. If individual BioProjects need to be referenced, state that "The data have been deposited with links to BioProject accession number PRJNA12899 in the NCBI BioProject database (https://www.ncbi.nlm.nih.gov/bioproject/)."

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Keywords

Lodderomyces elongisporus NRRL YB-4239 NRRL YB-4239 eEukaryotes

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