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Urai AE, Braun A, Donner THD. (2017) Pupil-linked arousal is driven by decision uncertainty and alters serial choice bias. Nature Communications, 8: 14637.

Version 8 2018-08-10, 12:22
Version 7 2017-03-03, 12:44
Version 6 2017-01-05, 09:46
Version 5 2017-01-02, 16:20
Version 4 2017-01-02, 15:18
Version 3 2017-01-02, 12:38
Version 2 2017-01-02, 11:26
Version 1 2016-12-27, 17:10
dataset
posted on 2018-08-10, 12:22 authored by Anne UraiAnne Urai, Anke Braun, Tobias Donner

This is the data to replicate all analyses from Urai AE, Braun A, Donner THD. (2017) Pupil-linked arousal is driven by decision uncertainty and alters serial choice bias. Nature Communications, 8: 14637.

See https://github.com/anne-urai/pupilUncertainty for the analysis code, including detailed instructions for replicating the figures from the manuscript.

You probably only want to use 2ifc_data_allsj.csv. Column names:

  • stim: generative stimulus identity, i.e. 'weaker' (-1) vs 'stronger' (+1)
  • coherence: generative coherence difference from reference
    • Note: a column stim * coherence will get you the signed motion coherence, that is most useful for generating regular choice-based psychometric functions.
  • difficulty: level of difficulty within the session; see 'Task and procedure' in the Methods section.
  • motionstrength: the estimated motion energy in each generated video. Correlates highly with stim*coherence, as shown in Figure 2c
  • resp: response of the subject
  • rt: reaction time, after offset of the second stimulus
  • correct: feedback given
  • correctM: feedback that should have been given, had the exact stimulus identity been based on the motion energy filtered values (rather than the generative values)
  • trialnr within each block
  • blocknr within each session
  • sessionnr within each sj
  • subjnr participant ID
  • baseline_pupil, decision_pupil, feedback_pupil, trialend_pupil, response_pupil: pupil dilation at various epochs during the trial
  • int1motion, int2motion: filtered motion energy values during the reference and test interval. Their difference generates the motionstrength column.
  • rtNorm: z-score(log(rt))


correctM:

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